Gene Mvan_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3325 
Symbol 
ID4644522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3539116 
End bp3539862 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content72% 
IMG OID639806802 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_954128 
Protein GI120404299 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.515948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGG CGGTCAAGCT GCACCGCCAC ACCGGGCGCC GCCGCGCCGC ACGCTTTCTC 
GCCGAAGGTC CCAACCTCGT CGAGGCCGCG TTGCGGCGCG GTCTCGTTCA CGAGGTCTTC
GCCACCGAGG GCGCGGCGGC GAAGTTCGCC GCCCTGCTCG GTGCCGCGTC CGTCCACCTG
GTCACCGACA AAGCGGCAAA AGCATTGTCG GACACCGTGA CCCCGGTCGG GCTGGTCGCC
GTGTGTTCGA TTCCGGAGGC TGATCTCGAT CAGGTGCTCG CCGGCAACCC GAAGCTGGTC
GCGGTGCCGG TCGGAATCTC CGAACCGGGG AACGCGGGCA CGCTGATCCG CGTCGCGGAT
GCGATGGGCG CCGACGCGGT GGTGCTCGCA GGCGACAGCG TCGACCCGTA CAACGGCAAG
TGCCTGCGCG CCTCGGCGGG CAGCATCTTC TCGATCCCGG TCCTCAGCGC CCCGGACGCC
GTCGCAGCTG TCACGAAACT GAAGGACGCG GGGCTGCAGG TGCTGGCGAC GGTGCTGGAC
GGTCCGGTCA GTCTCGAGGA CGCGGACCTG TCGGTGCCCA CCGCGTGGCT GTTCGGGCCG
GAGGCCCACG GCCTGCCCGC CGACGTCGCC GGACTCGCGA CGGCGGGGGT GCGGATTCCG
ATGCCCGGCA ACGCCGAAAG TCTCAACGTC GCCTCCGCCG CGGCGATCTG CCTCTACCAG
AGCGCGCGGA GCCAGGCGCC GGTCTGA
 
Protein sequence
MAAAVKLHRH TGRRRAARFL AEGPNLVEAA LRRGLVHEVF ATEGAAAKFA ALLGAASVHL 
VTDKAAKALS DTVTPVGLVA VCSIPEADLD QVLAGNPKLV AVPVGISEPG NAGTLIRVAD
AMGADAVVLA GDSVDPYNGK CLRASAGSIF SIPVLSAPDA VAAVTKLKDA GLQVLATVLD
GPVSLEDADL SVPTAWLFGP EAHGLPADVA GLATAGVRIP MPGNAESLNV ASAAAICLYQ
SARSQAPV