Gene Mvan_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3316 
SymbolpheT 
ID4644513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3528411 
End bp3530897 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content71% 
IMG OID639806794 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_954120 
Protein GI120404291 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.350397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.946576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTC CGTACAGCTG GCTTCGCGAG CTCGTCGCGG CCGGCGCGCC GGGCTGGGAT 
GTGTCCGCCG AGGAGCTTGA GCAGACGCTG ATCCGCATCG GTCACGAGGT CGAAGAGATC
ATCCCGGCGG GACCGGTGAC GGGGCCGCTG ACCATCGGGC GGGTCGTCGA GATCGAAGAG
CTCACCGAGT TCAAGAAGCC GATCCGGGCA TGCAAGGTCG ACGTCGGCGA GTCGGAGCCG
CGTGACATCG TCTGCGGTGC AACGAACTTC GTCGTGGGTG ACCTCGTCGT GGTGGCGCTG
CCCGGAGTGG TGCTGCCCGG TGATTTCACC ATCGCCACCC GCACGACCTA CGGCCGGACC
TCCGACGGCA TGATCTGCTC GGTCTCGGAG CTCAACCTCG GCTCTGACCA CTCCGGCATC
CTGGTGCTGC CGCCGGGCAC CGCGGAACCC GGCGATGAGG CCGCCGACGT GCTCGGCCTC
GACGACGTGG TGTTCGATCT CGCGATCACC CCGGACCGCG GCTACTGCCT CTCGGTGCGC
GGGATGGCCC GCGAGATCGC CAACGCCTAC GACCTGGAGT TCGTCGACCC CGCCGACGTC
GCCCCGCTGC CCGCCGACGG CGAGGCGCTT CCGGTGACCG TCGACCCGGG TACCGGCGTG
CAGCGGTTCG GGTTGCGTCC CGTCACCGGA ATCGACCCGA AGGCCGTGTC GCCGTGGTGG
ATTCAGCGCA GACTGTTGCT CAGTGGCATC CGTGCGATCT CGCCGGCGGT CGATGTGACC
AACTACGTCA TGCTCGAGCT GGGGCACCCG ATGCACGCCC ACGACCGCAG CCTCATCACC
GGTGGATTCC GGGTGCGCTT CGCCGAACCG GGGGAGAAGG TCGTCACCCT CGACGGCGTC
GAACGCACTC TCGATCCCGC CGACGTGCTG ATCGTCGACG ATGTCGCGAC CGCGGCGATC
GGTGGCGTGA TGGGCGCCGG GACCACCGAG GTCAGCGACG CCACCACCGA CGTGCTGCTG
GAGGCGGCCG TCTGGGATCC GGCGGCGGTG TCCCGCACCC AGCGCCGGCT GCGCCTGTAC
AGCGAGGCCG GACGGCGTTA CGAGCGCACG GTCGATCCCG CGGTGTCGGT CGCGGCGTTG
GACCGGTGCG CCACTCTGCT GGCCGACATC GCAGGCGGCA CAGTGGAACC CACGCTGACT
GACTGGCGGG GTGACCCGCC TCGCGCCGAC TGGGCGCAGC CACCGGTCAG CATGCCCGTC
GATCTGCCCG ACCGCACCGC CGGCGTCGAG TACCCGGAGG GCGCGGTGCG TAAGCGGCTG
ACCCAGATCG GCGCCTCGGT CGTCGTCGAC GGTGGCACGG TGACGGCCAC CCCACCGAGC
TGGCGGCCCG ACCTCCGTCA GCCCGCCGAC CTCGTCGAAG AGGTGATGCG CCTGGAGGGC
CTCGACGTGA TCCCGTCGGT GCTGCCCGCC GCCCCGGCGG GCCGCGGCCT GACGGCCGGC
CAGAAACGCC GCCGCGCGGT TGGAAAGTCG TTGGCGCTCA GCGGTTTCGT CGAGATCCTG
CCGACGCCGT TCCTGCCGGC GGGAATCTTC GACCAGTGGG GCCTCGACGC CGACGATCCG
CGCCGGAACA CCACGCAGGT GCTCAACCCA CTCGAATCCG ACAGGCCTCA TCTGGCCACC
ACGCTGCTGC CCGGTCTGCT GGAAGCGTTG ACCCGCAACG TCTCCCGCGG GGCGGTCGAC
GTTGCGCTGT TCGCCATCGC GCAGGTGGTC GAGCCCACGG CCGAGACCGG GGCAGTCGAG
CGCATCCCCA ACGACCGACG ACCCACCGAC GACGAGATCG CCGCGCTCGA CGCGTCGCTG
CCTCGCCAGC CCGAGCATGT CGCGGCTGTA CTGACCGGCC TGCGTGAACC GGCCGGGCCG
TGGGGCCGGG GCCGCCCGGT CGAGGCCGCC GACGCGTTCG AGGCTGTGCG GGTGATCGGC
CGCGCCGCGG GCATCGAGTT CACCCTGCGG GCCGGCCGGT ATCTGCCGTG GCATCCCGGT
CGCTGCGCGG AGATCGTGGT GGGCGACGTC GTCGTCGGCC ACGCCGGGCA GCTGCATCCG
GCGGTGGTCG AACGCTCCGG GCTGCCCAAA GGCACCTGCG CCGTGGAACT CGATCTCGAC
GCCGTGCCGC TGACCGAACG GCTGCCCGCA CCTGGCGTGT CGCCGTTCCC TGCCGTGTTC
CAGGACGTCG CGCTGATCGT CGACGAGGAC ATCGAGGCGC AGAGCGTCGT CGACGCCGTC
CGCGACGGCG CGGGCGAACT GCTCGAAGAC GTCCGGATCT TCGACGTCTA CACCGGTCCG
CAGATCGGCG ACGGACGCAA GTCGTTGGCG TTGGCGCTGC GCTTCCGCGC CCCCGACCGC
ACGCTCACCG AGGACGAGGC AAGCGCGGCC AGGGATGCCG CGGTCCGGGA GGCGGCGCGG
AGGGTGCACG CGGTGCAGCG TTCGTGA
 
Protein sequence
MRLPYSWLRE LVAAGAPGWD VSAEELEQTL IRIGHEVEEI IPAGPVTGPL TIGRVVEIEE 
LTEFKKPIRA CKVDVGESEP RDIVCGATNF VVGDLVVVAL PGVVLPGDFT IATRTTYGRT
SDGMICSVSE LNLGSDHSGI LVLPPGTAEP GDEAADVLGL DDVVFDLAIT PDRGYCLSVR
GMAREIANAY DLEFVDPADV APLPADGEAL PVTVDPGTGV QRFGLRPVTG IDPKAVSPWW
IQRRLLLSGI RAISPAVDVT NYVMLELGHP MHAHDRSLIT GGFRVRFAEP GEKVVTLDGV
ERTLDPADVL IVDDVATAAI GGVMGAGTTE VSDATTDVLL EAAVWDPAAV SRTQRRLRLY
SEAGRRYERT VDPAVSVAAL DRCATLLADI AGGTVEPTLT DWRGDPPRAD WAQPPVSMPV
DLPDRTAGVE YPEGAVRKRL TQIGASVVVD GGTVTATPPS WRPDLRQPAD LVEEVMRLEG
LDVIPSVLPA APAGRGLTAG QKRRRAVGKS LALSGFVEIL PTPFLPAGIF DQWGLDADDP
RRNTTQVLNP LESDRPHLAT TLLPGLLEAL TRNVSRGAVD VALFAIAQVV EPTAETGAVE
RIPNDRRPTD DEIAALDASL PRQPEHVAAV LTGLREPAGP WGRGRPVEAA DAFEAVRVIG
RAAGIEFTLR AGRYLPWHPG RCAEIVVGDV VVGHAGQLHP AVVERSGLPK GTCAVELDLD
AVPLTERLPA PGVSPFPAVF QDVALIVDED IEAQSVVDAV RDGAGELLED VRIFDVYTGP
QIGDGRKSLA LALRFRAPDR TLTEDEASAA RDAAVREAAR RVHAVQRS