Gene Mvan_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3287 
Symbol 
ID4644504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3494698 
End bp3495285 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content73% 
IMG OID639806762 
ProductTetR family transcriptional regulator 
Protein accessionYP_954091 
Protein GI120404262 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.443656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCATA GCGAGACAAG CCGTCCCAAA GAGGATCCGC GGATCGGGCA TTCGCGACGC 
GCCATCCTGC GCGCGGCCCT CGCCGAGTTC GCCGCCAACG GTTACGCCGG ATTCCGGATG
GAGTCGGTGG CGGCCCGCGC CGGAGTCGGC AGGAGCACCG TCTACCGGCA CTGGCCCGAC
AGGGCGGCAC TGGTCGCGGA CGCCCTGGCC GGCCTCAATC GGCAGCCCGA TCCCGGGCAC
GGGGACGGCG CCGATACCGC GGGGCAGCGC GCGCACGTCC TGCTGAGCCA CCTCGCGCAG
GCGCTGACCG ACTCACCGGT GTCGGCATGC ATCCCCGCGC TGATCCACGC CGCCGCCAAC
GACACCGATT TCCGCGACCG CCTGCACGGT TTCTCGGCGC AGCGCCGTCG ACGGCTCACC
GACGTCATCT CCGCCGGGGT CACGGCGGGC GAGTTCCCGG CCACGGTGGA CCCGGAGACC
GCCTCGGTGG CCTTGTCCGG CGGCGTGTTC TACCGCTGCC TGATGACCGC CGACGCCGCC
GACGCCGATT TCGTCGCGGG TCTGCTCGAC GCGGTCCTCG GCCGCTGA
 
Protein sequence
MSHSETSRPK EDPRIGHSRR AILRAALAEF AANGYAGFRM ESVAARAGVG RSTVYRHWPD 
RAALVADALA GLNRQPDPGH GDGADTAGQR AHVLLSHLAQ ALTDSPVSAC IPALIHAAAN
DTDFRDRLHG FSAQRRRRLT DVISAGVTAG EFPATVDPET ASVALSGGVF YRCLMTADAA
DADFVAGLLD AVLGR