| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3281 |
|---|
| Symbol | xerD |
|---|
| ID | 4644498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 3488600 |
|---|
| End bp | 3489553 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639806756 |
|---|
| Product | site-specific tyrosine recombinase XerD |
|---|
| Protein accession | YP_954085 |
|---|
| Protein GI | 120404256 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGACCG GTGTCGATCC GGCCGCCCTG GACGACCAGT TCCAGGGCTA CCTCGACCAC
CTCGCGATCG AACGCGGGGT GGCGGCCAAC ACACTGAGCT CCTACCGCAG GGATCTGCGG
CGCTACGCCG AACACCTGGC GTCGCGGGGC GTCACCGATC TGGCCGGCGT GGCCGAGGCC
GATGTCAGCG AGTTCCTGGT GTCGCTGCGC CGCGGCGATC CGGACAACGG CGTGGTGCCG
TTGTCGGCGG TGTCGGCCGC CAGGGCGGTG ATCGCGGTCC GGGGGCTGCA CCGGTTCGCG
GCCGCCGAAG GCATCACCAC CGTGGACGTC GCGCGTGAGG TGAAGCCGCC GACACCCGGC
CGCCGTCTGC CCAAGAGCCT CAGCATCGAT GAAGTCCTGG CGCTGCTGGA GGCGGCGGGC
GGCGACGGCG AGGCCGACGG CCCGCTGACG CTGCGCAACC GGGCGCTGCT GGAACTGCTG
TACTCGACCG GCGCCAGGAT TTCGGAGGCC GTCGGCCTCG ACGTCGACGA CGTCGACACC
GAGGCCCGGT CGGTGCTGTT GCGAGGCAAG GGCGGCAAGC AGCGCCTGAT CCCGATCGGG
CGGCCTGCGG TGAGCGCGCT GGACAACTAC CTGGTGCGGG GGCGTCCGGA CCTGGCACGC
CGCGGCCGGG GCACGCCCGC CATCTTCCTC AACGCCCGCG GCGGACGACT CTCGCGGCAG
AGCGCGTGGC AGGTACTGCA GGACGCCGCC GAACGTGCGG GGATCACGGC GACGGTCTCC
CCGCACGTGC TGCGGCACTC GTTCGCCACT CATCTGCTCG ACGGCGGCGC CGACGTCCGC
GTCGTGCAGG AGCTGCTGGG ACACGCGTCG GTGACCACCA CGCAGATCTA CACCATGGTG
ACGGTCACCG CGCTGCGCGA GGTGTGGGCC GGGGCCCATC CCCGGGCGCG CTAA
|
|---|
| Protein sequence | MTTGVDPAAL DDQFQGYLDH LAIERGVAAN TLSSYRRDLR RYAEHLASRG VTDLAGVAEA
DVSEFLVSLR RGDPDNGVVP LSAVSAARAV IAVRGLHRFA AAEGITTVDV AREVKPPTPG
RRLPKSLSID EVLALLEAAG GDGEADGPLT LRNRALLELL YSTGARISEA VGLDVDDVDT
EARSVLLRGK GGKQRLIPIG RPAVSALDNY LVRGRPDLAR RGRGTPAIFL NARGGRLSRQ
SAWQVLQDAA ERAGITATVS PHVLRHSFAT HLLDGGADVR VVQELLGHAS VTTTQIYTMV
TVTALREVWA GAHPRAR
|
|---|
| |