Gene Mvan_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3221 
Symbol 
ID4647621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3430632 
End bp3431303 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content67% 
IMG OID639806697 
Productprotein tyrosine phosphatase 
Protein accessionYP_954028 
Protein GI120404199 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.779486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA CTCCGGTGAC GCACCAACTG CGCCGTGATC TGCCCATCGA TCAGCAGTTG 
GCGTTGAAAG CGGCAGCCAA CCAGCTGCAG ACCGAGTTCG GGGACACCAT CGGAGCCGAG
ACCATCGAGC GTTTCCTGCA TTCGTCCTAC GCGCATTTCG CCGGCCGCGC AAAGGTTCCC
AACTTTCTTC CGCTGCTGGC CGAACGTTAC GCCCGCCAGC AACTGAGCGC CCTGGCCCGC
GTCGAAGCCA AGATCCCCGA CGGGAAACCC ACAGTGCTGT TCCTGTGCAC GCACAATGCG
GGACGCTCCC AGATGGCGCT GGGCTTCTTG ACCCACCTGG CCGGGGACAA AGTGGTGGGC
TGGTCCGGGG GGTCGGAGCC CGGTCACGAG ATCAACCCGG CCGCGGTCGC CGCGATGGCC
GAGGTGGGAA TCGACATCAC CGGCGAGTTC CCCAAGCCGT GGACCGAGGA GATCGTCCGC
GCCGCCGACG TGGTTGTCAC CATGGGCTGC GGCGACGCCT GCCCGGTATT TCCGGGCAAG
CGCTACGAGA ACTGGGAACT GACCGACCCC GCCGGACAGG GGTTGGAGGC GGTCCGGCCG
ATCCGCGACG ACGTCGAGGA ACGGGTGCGC CGGCTGCTTG CCGACCTCCA GGTCCCCGTC
GCGGTGCGCT GA
 
Protein sequence
MTDTPVTHQL RRDLPIDQQL ALKAAANQLQ TEFGDTIGAE TIERFLHSSY AHFAGRAKVP 
NFLPLLAERY ARQQLSALAR VEAKIPDGKP TVLFLCTHNA GRSQMALGFL THLAGDKVVG
WSGGSEPGHE INPAAVAAMA EVGIDITGEF PKPWTEEIVR AADVVVTMGC GDACPVFPGK
RYENWELTDP AGQGLEAVRP IRDDVEERVR RLLADLQVPV AVR