Gene Mvan_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3212 
Symbol 
ID4648490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3420918 
End bp3423158 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content65% 
IMG OID639806688 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_954019 
Protein GI120404190 
COG category[C] Energy production and conversion 
COG ID[COG2838] Monomeric isocitrate dehydrogenase 
TIGRFAM ID[TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG AGCAGCCGTC CATCATCTAC ACGCTGACCG ATGAGGCGCC GCTCCTCGCG 
ACCTACGCCT TCCTGCCCGT GGTCCGCACC TTCGCATCGG CTGCAGGCAT CGACGTCAAG
TCCAGCGACA TCTCCGTGGC GGCCCGCATC CTGGCCGAGT TCAGCGATCG CCTCACCGAC
GAGCAGAAGG TGCCCGACAA CCTGGCCGAG CTCGGCGCGC TCACGCAGGA ACCGGACACC
AACATCATCA AGCTGCCCAA CATCAGCGCC TCGGTGCCGC AGCTGCTGGC CGCGATCAAG
GAACTCAAGG CCAAGGGTTA CGACCTGCCC GACTACCCGG GCGACCCGAA GACGGACGAA
GAGAAGGCCG TCAAGGAGCG GTACGCCAAG GTGCTCGGCA GTGCCGTCAA CCCTGTTCTG
CGGCAAGGGA ACTCGGATCG CCGTGCGCCG AAGGCGGTCA AGGAGTACGC CCGCAAGCAC
CCGCACAGCA TGGGGGAGTG GTCGCAGGCC TCCCGCACCC ACGTCGCGAC CATGAAGCAC
GGCGACTTCT ACCACGGCGA GAAGTCGATG ACCCTCGACA AGGACCGCAA GGTCAAGATG
GTGCTCGAGC CCTCCGGCGG CGGCCCCGCC CTGGTCCTCA AGCCCGAGGT CGCGCTGGAA
AAGGGCGACG TCATCGACAG CATGTACATG AGCAAGAAGG CGCTGATCGA CTTCTACGAG
GAGCAGATCG AGGACGCCTA CAAGACCGGC GTGATGTTCT CGCTGCACGT CAAGGCGACC
ATGATGAAGG TCAGCCACCC CATCGTGTTC GGCCACGCGG TCAAGGTGTT CTACAAGGAC
GCCTTCGCCA AGCATCAGAA GCTGTTCGAC GAGCTCGGCG TCAACGTCAA CAACGGTCTG
TCGGATCTGT ACAGCAAAAT CGAGGTGCTG CCGGCGTCGC AGCGCGAGGA GATCATCGAG
GACCTGCACC GCTGCCATGA GCATCGACCC GAGTTGGCCA TGGTGGATTC GGCCAAGGGC
ATCTCGAACT TCCACTCGCC GTCCGACGTC ATCGTCGACG CCTCGATGCC CGCAATGATC
CGCCTCGGCG GCAAGATGTA CGGCGCCGAC GGCCGTACGA AGGACACCAA GGCCGTCAAC
CCCGAATCCA CGTTCTCCCG GATGTACCAA GAGGTCATCA ACTTCTGCAA GACCAACGGC
CAGTTCGACC CGCGCACCAT GGGGACCGTC CCGAACGTCG GTCTGATGGC CATGAAGGCC
GAGGAGTACG GCAGCCACGA CAAGACCTTC GAGATCCCCG AGGACGGCGT CGCCAACATC
GTCGACATCG ACACCGGCGA GGTCCTGCTG ACGCAGAACG TCGAAGAGGG CGACATCTGG
CGCATGCCGG TGGTCAAGGA CGCCGCGATC CGGGACTGGG TCAAGCTGGC GGTGACGCGC
GCCCGGCTGT CCGGCATGCC CGCGGTGTTC TGGCTCGACG ACGAGCGTCC GCACGAGAAC
GAACTGCGCG AGAAGGTGAA GGCCTACCTC AAGGAGGAGG ACACCGACGG CCTCGACATC
ACGATCCTGC CGCAGGTGTG GGCGATGCGG TACACCCTGG AGCGGGTGAT CCGCGGGCAG
GACACCATCG CGGTGACCGG CAACATCCTG CGCGACTACC TCACCGACCT GTTCCCGATC
CTGGAGCTGG GCACCAGCGC GAAGATGTTG TCCATCGTTC CGCTGATGGC AGGCGGCGGC
ATGTATGAGA CCGGCGCCGG CGGCTCGGCG CCCAAGCACG TCCACCAGCT GGTGGAGGAG
AACCACCTGC GGTGGGACTC CCTGGGTGAG TTCCTGGCGC TGGGCGCGTC GTTCGAGGAC
ATGGGTGCCA AGTTCGGCAA CAAGAAGGCG GAGCTGCTGG GCAAGACGCT GGACTCGGCG
ATCGGCAAGT TGCTCGACAA CGACAAGGGC CCGTCGCGCA GGACCGGGGA GCTCGACAAC
CGCGGCAGCC AGTTCTACCT GGCGATGTAC TGGGCGCAGG AGCTCGCCGA GCAGACCGAC
GACAAGGCGC TGGCCGAGCA TTTCGCGCCG CTGGCCAAGA CACTGGCCGA GAACGAGTCG
ACCATCGTCG ACGAGCTCAA TGCCGCGCAG GGCAAGCCGG TCGACATCGG TGGCTACTAC
TACCCGGACC AGGAGAAGAC GACCGCGGTG ATGCGCCCCA GCGCGACGTT CAACAGCGCG
TTGGAGGCCG CCGGCAGCTG A
 
Protein sequence
MSAEQPSIIY TLTDEAPLLA TYAFLPVVRT FASAAGIDVK SSDISVAARI LAEFSDRLTD 
EQKVPDNLAE LGALTQEPDT NIIKLPNISA SVPQLLAAIK ELKAKGYDLP DYPGDPKTDE
EKAVKERYAK VLGSAVNPVL RQGNSDRRAP KAVKEYARKH PHSMGEWSQA SRTHVATMKH
GDFYHGEKSM TLDKDRKVKM VLEPSGGGPA LVLKPEVALE KGDVIDSMYM SKKALIDFYE
EQIEDAYKTG VMFSLHVKAT MMKVSHPIVF GHAVKVFYKD AFAKHQKLFD ELGVNVNNGL
SDLYSKIEVL PASQREEIIE DLHRCHEHRP ELAMVDSAKG ISNFHSPSDV IVDASMPAMI
RLGGKMYGAD GRTKDTKAVN PESTFSRMYQ EVINFCKTNG QFDPRTMGTV PNVGLMAMKA
EEYGSHDKTF EIPEDGVANI VDIDTGEVLL TQNVEEGDIW RMPVVKDAAI RDWVKLAVTR
ARLSGMPAVF WLDDERPHEN ELREKVKAYL KEEDTDGLDI TILPQVWAMR YTLERVIRGQ
DTIAVTGNIL RDYLTDLFPI LELGTSAKML SIVPLMAGGG MYETGAGGSA PKHVHQLVEE
NHLRWDSLGE FLALGASFED MGAKFGNKKA ELLGKTLDSA IGKLLDNDKG PSRRTGELDN
RGSQFYLAMY WAQELAEQTD DKALAEHFAP LAKTLAENES TIVDELNAAQ GKPVDIGGYY
YPDQEKTTAV MRPSATFNSA LEAAGS