| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3180 |
|---|
| Symbol | |
|---|
| ID | 4644170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3385123 |
|---|
| End bp | 3386220 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639806657 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_953988 |
|---|
| Protein GI | 120404159 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.428606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.106977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGC TGTTCAGCCA GTTCAGGCAG ACGCCGCCGA GTCCGTCGGG GCGCCTGCGT
CACGACGTGA TGCTCGGTAT TGCCGAGACC GCGATCGCCG GGATGTTCGC GGCCTCCGCG
GCGGTACGGC GCGTCCGGAT GCCTGCCGCC GGTCCGGACA CCATCCCGCT GACCGTCACC
GGGCGCCGGG TCGTCGCCCA CGACCAGGAT GTGGTCGAAC TGACGCTGGC CGGCGACCGC
CTGCCCCGGT GGTTCCCGGG CGCACACCTC GATGTGCACC TGCCCAGCGG ACGCGTCCGG
CAATACTCGC TGTGCGGCGA CCCCGACTCC GCTGAATACC GGATCGCCGT ACGGCGCATT
CCCGACGGCG GTGGCGGCTC GGTCGAGGTG CACGACGCGC TCGAGATCGG TTCGACGGTG
CACACCCACG GGCCGCGCAA CGCCTTCCCG TTGACCGTGC CGGGATACGG CTCCCCCGCC
CGCCGATTCC GTTTCATCGC AGGCGGAATC GGCATCACCC CGATCCTTCC GATGCTCGGC
CTGGCCCGGC GCCTCGGCGT CGACTGGTCG ATGGTCTACA CCGGGCGCAG CGTCGACAGC
CTGCCGTTCG TCGACGAGGT CACCGCGTTC GGCGCAGCCG TCGACATCCG CACCGACGAC
CGTCACGGGC TGCCCGCGGC GGCCGAACTG CTCGGCGACT GTGCCGACGG CACGGCCGTG
TACGCGTGCG GCCCGGCCCC GATGCTCACC GCCGTGCGCG CCGCGCTCGT CGGACGTGAC
GACGTCGAAC TGCACTTCGA ACGTTTCGCC GCACCACCGG TCACCGACGG ACGGCCCTTC
CAGGCGACGG TCGCGTCCAC CGGGCAGCAG GTCGACGTCG GCGCCGACGA GACATTGCTG
GCCGCCCTGC GCAGGGCCGG GGTGGACGCG TCGTACTCAT GCCAGCAGGG GTTCTGCGGA
ACCTGCCGGA CCAGGGTTCT CGCGGGTTCG GTCGAGCACC GCGACACGCT GCTGACCGGT
CCAGAGCGCG CCGCAGGACT GATGTTGACG TGCGTGTCCC GGGCCGGGGA CGGCTCCGGC
CTGACGCTGG ATCTGTGA
|
|---|
| Protein sequence | MTRLFSQFRQ TPPSPSGRLR HDVMLGIAET AIAGMFAASA AVRRVRMPAA GPDTIPLTVT
GRRVVAHDQD VVELTLAGDR LPRWFPGAHL DVHLPSGRVR QYSLCGDPDS AEYRIAVRRI
PDGGGGSVEV HDALEIGSTV HTHGPRNAFP LTVPGYGSPA RRFRFIAGGI GITPILPMLG
LARRLGVDWS MVYTGRSVDS LPFVDEVTAF GAAVDIRTDD RHGLPAAAEL LGDCADGTAV
YACGPAPMLT AVRAALVGRD DVELHFERFA APPVTDGRPF QATVASTGQQ VDVGADETLL
AALRRAGVDA SYSCQQGFCG TCRTRVLAGS VEHRDTLLTG PERAAGLMLT CVSRAGDGSG
LTLDL
|
|---|
| |