Gene Mvan_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3179 
Symbol 
ID4644169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3384224 
End bp3385126 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID639806656 
Producthypothetical protein 
Protein accessionYP_953987 
Protein GI120404158 
COG category[R] General function prediction only 
COG ID[COG3687] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.17273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.100339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGAC CGCGCCGTTT CGACGCCGAG ATCGACCCGG GGCCCGTGCA GATCCAGGCG 
CGCAAGGTGC ATTTCGACGT GGCCGACGTG CCGCTGCACT GGATCCCCGG CCACCCGGTC
GCCTCGCACG TGGTCAGTGT GCTCAACATC GTGCTGCCCG CCGGGGAGCG GTGGTTCGTC
CAGACCTTCA ACGAGGCCTT GCCGCTCGTC AAGGACCCCA AGCTGGCCGA TGACATCCGC
GGCTTCATCG GCCAGGAGGC CACCCACGCC GACGTGCACG ACCAGGTCCT GCACGAGTTC
ATGGTCAGCC ACGGGGTGAA CCCCGCTCCG ATCCTCGCCC AGATCGAGCA CATGTTCACC
GGCGTTCTCG CCCCACCGGA CGAGACGGTC GACGAGTCCC GGCGCTGGAG CCACCTGTGT
GACCGGCTGT GGTTGATCGC CGCGATCGAG CACTACACCG CGGTGATGGG CGATTTCGCA
CTCAACTGCA CCTGGGACGA TCACGGAGCG GACCCCACGC TGGTCGACCT GTTCCGCTGG
CACGGCAGCG AAGAGGTCGA ACACCGAAGC GTCGCACACG ATGTCGCGAT GTACTTCCAC
GACAGCTACC TGGCCAGAAT CCGTGCCATG TCCGTGGCGG CCACGATGCT CTTCGTCTTC
TTCCAACGGA CCGCCTGGTA CCTGGTGAAG CACGACCCCG GCGTCGATGC CAACTGGTGG
GCGTTCAACC GGATGCGCAT GCGCGACTCC AAGCTCGGAC TGCTCCCGAA GTATCGAAAG
CTGTTCGGGT CCAGCACTCT CGGCTACTTC CGGCCCGGGT ATGCGCCGGA GCAACTGGGC
TCCACGGCGC AGGCCGTCGC CTACCTGGCG TCCTCGCCGG CGGCCCGCGC GGCGCACCTA
TGA
 
Protein sequence
MLRPRRFDAE IDPGPVQIQA RKVHFDVADV PLHWIPGHPV ASHVVSVLNI VLPAGERWFV 
QTFNEALPLV KDPKLADDIR GFIGQEATHA DVHDQVLHEF MVSHGVNPAP ILAQIEHMFT
GVLAPPDETV DESRRWSHLC DRLWLIAAIE HYTAVMGDFA LNCTWDDHGA DPTLVDLFRW
HGSEEVEHRS VAHDVAMYFH DSYLARIRAM SVAATMLFVF FQRTAWYLVK HDPGVDANWW
AFNRMRMRDS KLGLLPKYRK LFGSSTLGYF RPGYAPEQLG STAQAVAYLA SSPAARAAHL