Gene Mvan_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3171 
Symbol 
ID4644161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3373226 
End bp3374143 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID639806648 
Productsterol desaturase-related protein 
Protein accessionYP_953979 
Protein GI120404150 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.290966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0471796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTTCC TGGACTTCCT TCCGCCGCAG ATGCGCGAAC CGGTGCTGTT CGCGATCCCG 
TTCTTCCTGC TGCTGCTCAC CATCGAGTGG ACCGCCGCGC GCAAGCTCGA GCACACCGCC
CCGGACGGGG GAAGTCCGGC CGTCGGCGCG TACCACACCC GCGATTCGTG GGCGAGCGTG
TCGATGGGGC TGGTGTCCAC CGTCACCATG AGCGTGTGGA AGTTCCTCGC GCTGTTGGGG
TATGCCGCGC TGTACGCCTA TGTGGCGCCG TGGCAGCTGT CGGCGACCCA GTGGTACACG
TGGGTGATCG CGCTCGTCGG CGTCGACCTG CTGTTCTACG TCTATCACCG GATGGCGCAC
CGGGTCCGGA TCGTCTGGGC CACCCATCAG GCGCACCACT CCAGCCGGTA CTTCAACTTC
GCGACCGCGC TGCGGCAGAA GTGGAACAAC AGCGGTGAGA TCCTGATGTG GATCCCGTTG
CCGCTGTTGG GTGTTCCGCC GTGGATGGTG TTCTTCGCGT TCTCGGTCAG CCTGATCTAC
CAGTTCTGGA TCCACACCGA GCGCATCGGA AAGCTCTGGC TTCCCGTCGA ATTCATCTTC
AACACGCCGT CCCACCACAG GGTCCACCAC GGCATGGACA AGCTGTACCT GGACAAGAAC
TACGGCGGGA TCCTGATCAT CTGGGACCGT CTCTTCGGCA CGTTCCAACC CGAGGTGTTC
CGGCCCCACT ACGGGCTGAC CAAGCCGGTG GACACGTTCA ACATCTGGAA GCTGCAGACC
CACGAGTACG TCGCGATCGG GCGCGACGTC CGTGCCGCGC GGGGGCTGCG CGCCAAGCTC
GGCTACATCT TCGGTCCGCC GGGATGGGAA CCGTCGACGG CCCCGGGGGC GCGGGCGGCG
GCGCATGCCA CGCCGTAG
 
Protein sequence
MEFLDFLPPQ MREPVLFAIP FFLLLLTIEW TAARKLEHTA PDGGSPAVGA YHTRDSWASV 
SMGLVSTVTM SVWKFLALLG YAALYAYVAP WQLSATQWYT WVIALVGVDL LFYVYHRMAH
RVRIVWATHQ AHHSSRYFNF ATALRQKWNN SGEILMWIPL PLLGVPPWMV FFAFSVSLIY
QFWIHTERIG KLWLPVEFIF NTPSHHRVHH GMDKLYLDKN YGGILIIWDR LFGTFQPEVF
RPHYGLTKPV DTFNIWKLQT HEYVAIGRDV RAARGLRAKL GYIFGPPGWE PSTAPGARAA
AHATP