Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3171 |
Symbol | |
ID | 4644161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 3373226 |
End bp | 3374143 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639806648 |
Product | sterol desaturase-related protein |
Protein accession | YP_953979 |
Protein GI | 120404150 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.290966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0471796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGTTCC TGGACTTCCT TCCGCCGCAG ATGCGCGAAC CGGTGCTGTT CGCGATCCCG TTCTTCCTGC TGCTGCTCAC CATCGAGTGG ACCGCCGCGC GCAAGCTCGA GCACACCGCC CCGGACGGGG GAAGTCCGGC CGTCGGCGCG TACCACACCC GCGATTCGTG GGCGAGCGTG TCGATGGGGC TGGTGTCCAC CGTCACCATG AGCGTGTGGA AGTTCCTCGC GCTGTTGGGG TATGCCGCGC TGTACGCCTA TGTGGCGCCG TGGCAGCTGT CGGCGACCCA GTGGTACACG TGGGTGATCG CGCTCGTCGG CGTCGACCTG CTGTTCTACG TCTATCACCG GATGGCGCAC CGGGTCCGGA TCGTCTGGGC CACCCATCAG GCGCACCACT CCAGCCGGTA CTTCAACTTC GCGACCGCGC TGCGGCAGAA GTGGAACAAC AGCGGTGAGA TCCTGATGTG GATCCCGTTG CCGCTGTTGG GTGTTCCGCC GTGGATGGTG TTCTTCGCGT TCTCGGTCAG CCTGATCTAC CAGTTCTGGA TCCACACCGA GCGCATCGGA AAGCTCTGGC TTCCCGTCGA ATTCATCTTC AACACGCCGT CCCACCACAG GGTCCACCAC GGCATGGACA AGCTGTACCT GGACAAGAAC TACGGCGGGA TCCTGATCAT CTGGGACCGT CTCTTCGGCA CGTTCCAACC CGAGGTGTTC CGGCCCCACT ACGGGCTGAC CAAGCCGGTG GACACGTTCA ACATCTGGAA GCTGCAGACC CACGAGTACG TCGCGATCGG GCGCGACGTC CGTGCCGCGC GGGGGCTGCG CGCCAAGCTC GGCTACATCT TCGGTCCGCC GGGATGGGAA CCGTCGACGG CCCCGGGGGC GCGGGCGGCG GCGCATGCCA CGCCGTAG
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Protein sequence | MEFLDFLPPQ MREPVLFAIP FFLLLLTIEW TAARKLEHTA PDGGSPAVGA YHTRDSWASV SMGLVSTVTM SVWKFLALLG YAALYAYVAP WQLSATQWYT WVIALVGVDL LFYVYHRMAH RVRIVWATHQ AHHSSRYFNF ATALRQKWNN SGEILMWIPL PLLGVPPWMV FFAFSVSLIY QFWIHTERIG KLWLPVEFIF NTPSHHRVHH GMDKLYLDKN YGGILIIWDR LFGTFQPEVF RPHYGLTKPV DTFNIWKLQT HEYVAIGRDV RAARGLRAKL GYIFGPPGWE PSTAPGARAA AHATP
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