Gene Mvan_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3144 
Symbol 
ID4646376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3339777 
End bp3340847 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content73% 
IMG OID639806621 
Producthypothetical protein 
Protein accessionYP_953952 
Protein GI120404123 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.985992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0165382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGCCCG GCCCGGCCCC GATGGCCGGG CCGGACCCCG ACGCGCTGCA TCCACGCCAC 
CGGCTGCCGT CGTCACAACG CAAGATCCGG CCGCCGTTCG TGCTCGACCC CAGCATGCGG
TTCTACTCGC CGCAGGCCAA TGTCGACGCC CTGGGCCACC AGCGGGTGGC CGAGTGGCTT
GCCTACGTCC AGCACGACTG GGAACCCACG CCAGTGCCCG GCACCCGTGC CCGGCTCGGG
TTGCTGCTGC CGTGCACCAA GTACAAGCCC TACGCCACCA GCCGCGAGCA CCGCAGCGTC
AACAGCGCGT TGCTGGCCGC AGGCTGGCGC CCGTCACGCC CGTACGACGG TCCTGCCGAG
CTGCGCGGTG TGCTTGACGA CGGGGCACCC GAGGACGTGC TGAACACCGC ACCACTGGTG
CGTGACGGAG TCGTACTGGA CCGGTTCGTG ATCTCCGAAC CGCTGGCACT GGTGCCGTAC
GAGCTGACCA TGACGTTCCG CGGCGCCCAG GCCCCGGCCG CGTCCTACGA CGATCCCGGC
ATGTTCGAGA ACCGTGGCAC CTCGGTGTCG CCGGAACGCG CCGACTGCAC CGCCACCGCC
CGGCGCGACG GGACGTGGGC GTGGGGGCCG GCCGAGCGGC AGGCCTACGC GGAGATGCAC
AACGCGATGG CCGACGCGCT GGGCGTCACG CTCGCCCGGA TCTCCCCGGC CTACCGGACG
CTGCTGGCGT GGGTCTCCCC CGGCCTGACA CACCGCAGCT TCCTGGCCGA CGCCGCGTTC
CGCGCCGAGG ACGGCCTGCC CACCGCGCGG CGCGGAGTGC GCGGTGAGAT CCCGCTGCGC
GGCGCACTCG ACGCGGTGCC CGGCGTCGTG GACATACTGC CCACCCGCGA GCAGATCGCC
TGCGCCAAAG AGGAACTCGC CGAACGGTTG CGCCGCGAAG GCCGCCCCGC CGGGACCGGG
TCGGTACGCG CGGTCTATGC CCGCGGCGAC GGCCACGACA CCCCGCTGGG CCTGCCGGAA
CTGACCGCCG CACTGGTGGC GCGGCTGGAC TTCGAGGCGG CCCGGCTGTG A
 
Protein sequence
MMPGPAPMAG PDPDALHPRH RLPSSQRKIR PPFVLDPSMR FYSPQANVDA LGHQRVAEWL 
AYVQHDWEPT PVPGTRARLG LLLPCTKYKP YATSREHRSV NSALLAAGWR PSRPYDGPAE
LRGVLDDGAP EDVLNTAPLV RDGVVLDRFV ISEPLALVPY ELTMTFRGAQ APAASYDDPG
MFENRGTSVS PERADCTATA RRDGTWAWGP AERQAYAEMH NAMADALGVT LARISPAYRT
LLAWVSPGLT HRSFLADAAF RAEDGLPTAR RGVRGEIPLR GALDAVPGVV DILPTREQIA
CAKEELAERL RREGRPAGTG SVRAVYARGD GHDTPLGLPE LTAALVARLD FEAARL