Gene Mvan_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3140 
Symbol 
ID4646372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3336175 
End bp3336759 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID639806617 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_953948 
Protein GI120404119 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.211117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.101802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACG CTCCTGTGCG TGACCGGGTG CTGACGGTGC CCAACGCACT GTCGGTGATC 
CGCCTCGTGC TGGTCCCGGT CTTCCTGTAT CTGCTGCTGG CCGCCGGTGC GACGGGGTGG
GCTGTCGCGA TCCTGATGTT CAGCGGCGCC TCCGACTGGG CGGACGGCAA GATCGCCCGG
CTGTTCGACG GCCAGTCGTC GCGGCTCGGC GAACTGCTGG ACCCGCTGGT CGACCGGATC
TACATGGTCG TCGTCCCGAT CTCGATGGCT GCGGTGGGCT TCGTTCCGTG GTGGGTGGTG
GCGTTGCTCC TCGGCAGGGA TCTGGTGCTG GCAGGCACGC TTCCGCTGCT GCGCCGCCGC
GGGTTGACCG CATTGCCGGT CACCTACATC GGAAAGGCCG CCACGTTCGC GCTGATGTCA
GGTCTGCCAC TGGTGCTGCT CGGACAGGTC GACGCCCAGT GGGCCAGGGT CGTGCTGGCG
CTCGGGTGGG GGTTCCTGAT CTGGGGTCTG GCGATGTATC TGTGGTCGGG GGCGCTCTAT
CTCGTGCAGG TCGGGATGGT GATGCGGACG TTGCCGCCGT CATGA
 
Protein sequence
MDHAPVRDRV LTVPNALSVI RLVLVPVFLY LLLAAGATGW AVAILMFSGA SDWADGKIAR 
LFDGQSSRLG ELLDPLVDRI YMVVVPISMA AVGFVPWWVV ALLLGRDLVL AGTLPLLRRR
GLTALPVTYI GKAATFALMS GLPLVLLGQV DAQWARVVLA LGWGFLIWGL AMYLWSGALY
LVQVGMVMRT LPPS