| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3128 |
|---|
| Symbol | |
|---|
| ID | 4646158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 3318921 |
|---|
| End bp | 3324407 |
|---|
| Gene Length | 5487 bp |
|---|
| Protein Length | 1828 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639806605 |
|---|
| Product | beta-ketoacyl synthase |
|---|
| Protein accession | YP_953936 |
|---|
| Protein GI | 120404107 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3321] Polyketide synthase modules and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.446873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAG CTTTCGACGA GGACGCAATC CGGAACTGGT TGGTCGACTA CCTGGTCACC
AACATCGGTT GCAGTCCCGA CGAGATCAAT TTCGATGCAC CCCTGAACGA CCTGGCCGTC
GGTTCCAGTG ACGCCGTCGT GCTGACCGGC GAGCTCTCCG AGCTGCTGGG CCGCACGGTG
TCGCCGGTGG AGTTCTGGCA GTACCCGACG ATCAACGCGC TGGCGAAGTT CCTCACCGGT
GGTGAGGTCG AGCCGGCGAT CGAGGCCAGC GTTGGCGGCG GCGTCAGCCG CGATTACGGC
GCCGACGACG AGCCGATCGC GGTGATCGGC CTGGGCTGCA GATTTCCTGG AGGGGACGGC
CTCGACGGCA ACATCACGGG TCCGGATGCG TACTGGCGGT TCCTGATGGA AGGCCGTTCG
GCGGTCCGGC AGGTGCCCGA GGAGCGCTGG GAGTCCTTCC AGATCAACAC CCCGGAGGCC
GCGGCGGCGC TGGCGGGCAC GACCCGCTGG GGCGCGTTCC TGCGCGACCT GGACGCCTTC
GACGCCGAGT TCTTCGAGAT CTCGCCGAGC GAGGCCGACA AGATGGATCC TCAGCAGCGG
CTGCTGCTTG AGGTGACCCA GGAGGCGCTC GAGCACGCCG GCATCCCGAC GCACACGCTG
CGGCACTCGC AGACCGGTGT GTTCGCGGCG GCCTGTCTGG GCGAGTACGG CTATCTGTCC
ACCGTCGACC TCGGCGACGT CGACTCGTGG TCCGGCACGG GCGGGGCGTT GAGCATCATC
GCCAACCGGG TGTCGTACTA CTTCGACCTG CGCGGCCCGT CGGTGACCAT CGACACCGCC
TGCTCGTCGT CTTTGGTGAC GATCCACCTC GCATGCCAGA GCCTGCGCTC CGGTGACTCC
AACATGGCGC TCGCCGCCGG GGTGAACCTG CTGCTGTCGC CCGCGGTGAC GCGCAGCTTC
GACCAGCTCG AGGCGATGTC GCGCACCGGG CAGTGTCACG CTTTCGACGC CGGCGCCGAC
GGCTTCGTGC GCGGCGAGGG TTGCGGGGTG ACGGTGCTCA AGCGGCTGTC CGACGCGCAG
CGCGACGGAG ACCGCATCCT CGCGGTCATC CGCGGGTCCG CGGTGAACCA GGACGGCCGC
TCCAACGGCC TGATGGCCCC GAACCCGGCC GCCCAGATGG CGGTCCTGCG GTCGGCGTAC
TCGGCCGCAG GTGTCGAACC CCGCGATGTC GACTACGTCG AGACGCACGG CACCGGCACC
CTGCTGGGTG ACCCGATCGA GGCGCGCGCG CTGGGGACCG TGCTGGGCCG CGGCCGCGCC
GCCGATGCGC CGCTGCTGCT CGGTGCGGTC AAGTCCAACC TGGGCCACCT CGAAGCCGCC
GCCGGTGTCG CCGGGTTCAT CAAGGCCGTC CTGGCCCTGC AGCACCAGCA GATCCCGGCC
AACCTCGGAT ACGAGAAGCC CAACCCGCAC ATTCCGTTCG ACAACCTGCG GTTGAAGGTC
ATCGCCGAGC ACACCGAATG GCCCGCCCCG GCCGGGCGCC CGCGCCGCGC CGGCGTCTCG
TCGTTCGGGT TCGGCGGCAC CAACGCCCAC GTGGTCATCG AGCAGGCCCC GCCCAAGGCG
CCCGCCACGA ACGGCCAGGG CGAGCCCGCG GTGACCACGC TGGTGGTCTC CGGGCGCACC
GCCGAGCGCA TCGCCTCCGA GGCCGGCATG CTGGCCGAGT GGATGGCCGG CCCAGAGGGC
TCGCTGGCGT CGCTGCCGGA GGTGGCGCAC ACGCTGAACC ACCATCGCTC GCATTACAAC
AAGTTCGCCA CCGTCGCCGC CCGCGACCGC GATCAGGCCA TCGCCGGGCT GCGTGCACTG
GCGGCGGGCC AGACCGCACC CGGTGTGGTG GGTGCCCCGA CGGGGGCACG CAAGCGGGGC
ACGGTGTTCG TGTATTCGGG TCAGGGGTCG CAGTGGCCGG GGATGGCCCG GCAGCTGTTG
GCTGACGAGC CGGCGTTCGC GAACGCGTTG GCCGAGATCG AGCCGGTGTT CGTCGAGCAG
GTCGGTTTCT CGTTGCGTGA CGTCATCGCC GGTGGCGAGA CCGTCAGTGG TGATGCGCAG
GTTCAGCCGG TGCTGATGGG TCTGCAGCTG GCGTTGACGG AGCTGTGGCG GTCCTACGAT
GTGCATCCGG ATGCGGTGAT CGGTCATTCG ATGGGTGAGG TGACCGCTGC GGTGGTGGCC
GGGGCGTTGA GTCTGGCCGA CGGGCTGAAG GTCATTGCCG CGCGGTCGTC GATCATGTCC
CGGCTGGCCG GGCAGGGCGC CGTCGCGCTG GTCGAACTCG ACCCCGAGGC CGCGGCCGCC
TTCATCGCCG ACTATCCGAG CGTCGAGGTG GCGGGCTTCG TCTCGCCGCG CCAGACCGTG
GTGGCCGGCC TGCCCGAGCA GGTCGACGCC GTCATCGCCG CGGTCACCGC ACAGGAGAAG
TTCGCCCGCC GGGTGAACAT GGAAGTCGCG TCCCACACGG CGCTGATGGA TCCGGTGCTG
CCCGATCTGC GCGAGGCGCT GGCCGGCGTC ACCCCGCGCA CGCCGAACAT CCCGTTCCTG
TCGACGGTCA CCGAGCCCGA CGGCGAACCG GCCCTGGACG CCGACTACTG GGTGGCCAAC
GTGCGCCAAC CGGTCAAATT CAGCCAGGCA GTCACGGCCG CCGCGCAGGA GATCGGCACG
TTCATCGAGG TCAGCGCCAA CCCGATCCTG ACGTACGCGA TCAACGACAC GCTGTCGTCG
GCCAGTCATG TCAGCCTAGG CACGCTGGCC CGCGACGCCG ACGACACGTT GACGTTCCAC
ACCGCGCTCA ACGCGACGTT CACCGGCCAC CCGCCGGTGA CGCCGCACCA CGGTGAACCG
CACATCCAGC TGCCCACCAC GCCGTGGCAT CACACGCACC ACTGGGCGAT TCGTAAGCAC
ACCGCCTCGG GGGCGACGGC GCCCCGACCG GGCACCGTGC TGGGGTCGCA CACCGCCGTC
GCGGGAACGC AGCCGGGCCA TCTGTGGCAG GCCCGGCTCG CGCCGCAGGC CAAGCCGTAC
CCGCAGCCGC ACAAGTTCGC CGGAGTGGAG ATCGTCCCGC TGTCGGTGCT GCTGCAGACG
CTGTCGCTGG CTGCCGCCGA GTCCGGTGCC CGTGCTGTCG CCGACGTCCG GTTCGACTTC
CCGATCACGG TGGACGCACC GCGGGTGGTC CAGGTCGTCA GCGACGGCGA GACCATCACC
GTCTCGTCGA GCACCGCTGC CGCCGGTTCG GACGACTCCG CCCAGCGCTG GATCCGCCAC
CTCACGGCGC GGGTCGCGCA CCGGGTCGCC GACAGCCCGG CCACGGCCGG TACTGCGCAG
TCGTCCGGGT ACGACCCGTC GGCGCTGGCC GAACTGCACA ACGCCTGGGG CATCGACGGG
ATGGCGTACC CGTGGACGGT CGCCTCCCAC GAGTCGGCGC CCGGCGAGCT GCGCACCGTG
ATCGACCTGA CACCCGGCTC CCTGGTGGGT CTGCTCGACG CCGCGGTCAA CCTCGGCCGC
CTGGTCGACT CGTCGAGCCC CGGCCTGATG GTGCCGTCGG CGGCCGAGAG CGTGCGTTTC
GGCGACGACG CCACCGGCAC AGGTGGAGTC ATCACGGCGC GCAGCCGCGG ACGCGACGGC
GACGATCTGC TCGTCGACAT CTCGATCGGC GGAGCCGGCG GCGCGGAGTA CGCCCACATC
ACCGGGCTGC GGTACACGCC GGTCGAGATC GGCACCGTCA CCACCTCGGC CGCCGCCGAC
CCCCAGCGCG TCGCGCACCG GCTCGACTGG CAGCCCTGGA CGCCCGCCGC CGACGCCGGG
CCCGACACCG GTTCCGTCGC GGTCATCGGT GACGACGATG TGGCGGCCGC CGTCCGCGGC
GCCGTCGCCG CCAACGGACA CGCAGTCGCC GAGATCCCCG ACGCCCGCTT CGTGGTCTAC
GTCGCCGACG TCGGCGACGT AGACAGCGAC CAGGACGTCG CGGTGCGGCT CACCACCGAG
GTCGCCGACC TGGTCGGCAC ACTTGCCGAA CGTGATCCGC GGAATCCGGC CACGCTGTGG
ATCGTCACCC GCGGGGTGTA CGAGTCCGCC ACGGCCGCAG CGCTGCCGCA GAGCACCCTG
TGGGGTCTGG CCGGAGTTGT CGGCGCCGAA CAGCCGCAGC TGTGGGGCGG GCTGGTCGAC
CTTGCGGGCG AGGACCCGGC GGGTTCGGCG GAGGCGCTTG CCGCACTGCT GCCCACACCG
GTCAAGTCCG TCGCGATCCT GCGGGACGGG CAGCTGCGCA CCTCCGTGCT GGCCGAGTTC
ACCGAAGCCC CGGCCCGGGA GACGTTGCGG TGCAGGCCCG ACGCCGCCTA CCTGATCACC
GGCGGTATGG GCGTCCTGGG TCTGCTCATG GCGGACTGGC TGGCCGACCG CGGCGCCCGC
CGCGTGGTGC TGGCGGGCCG GACACCGCTG CCGCCCCGCC GGGACTGGGA CGACGAGTCG
ATCGACGCGG ACACGCGCCA CAAGATCGCC GCGATCCGCG CGCTGGAATT GCGCGGCGTG
TCCGTCGACA CCGTGGCACT CGACGTCGGG TCCCGTGAGG CGCTGACCGC GGTGCTCGAC
AAGCGCGACG GTGACGGCGC CCCGCCGATC CGCGGCGTCA TCCACGCCGC GGGTATGACG
GAGGCGCAGC TGCTCACCGA GATCGAGGCG GACCGCGTGC ACCGCACGGT CTGGCCGAAG
ATTGCCGGCG CCAAGGTGCT CGACGAGCTC TTCCCCCCGG GCAGCCTCGA TTTCCTGTAT
CTGGCCGCCT CGGCGGGCGC CGTGTTCGGC ATCCCCGGAC AGGGTGCCTA CGCCGCGGGC
AATGCCTACC TCGACGCGCT GGCGCGGTCG CGGCACCACA GGGGCGACAA CACGGTCAGC
CTGGACTGGG TGGCCTGGCA GGGTCTGGGC TTCGGCAGCG AGGCCCAGGT CGTGGTCTCC
GAGCTGGAGC GGGTCGGGTC GCGGCCCGTC GTGCCGGCCG AGGCGTTCGC CGCGTGGGAC
TTCGTCACCC GCTTCGACGT GGCCCAGGTC GTGATGGCGC CGATGCAGTC CGCGGAGGAC
GCCGCCGCGG TCACCGCCGA CACCCACCGC GCACCCACGC GGGACTGGAC GGCGATGGCC
CCGGACGAGC TGCTGGCCGA GCTGCAGGAC GGGCTGCGCG GCATCCTGGC CACCGAGCTG
CGGTTGCCCG AGAGCGACGT CCACACCGAC CGGCCCTTCG CGGAGATGGG TCTGAACTCG
GTGATGGCGA TGTCGATCCG CCGTGAGGTG GAGCGTCTGG TCGGGCTGGA GTTGTCGGCG
ACGATGCTGT TCAACCACCC GACGATCGAG TCGTTCGCGA GCTATCTCGC ACAACAGCTC
GCACCTGAGA CCGGCGGCGA CGACGAGGTG GCCGACGATT CGGGCGGCAG CCTGCTCGAC
TCGCTGTTCG ACAGCGTTGA GAACTGA
|
|---|
| Protein sequence | MTSAFDEDAI RNWLVDYLVT NIGCSPDEIN FDAPLNDLAV GSSDAVVLTG ELSELLGRTV
SPVEFWQYPT INALAKFLTG GEVEPAIEAS VGGGVSRDYG ADDEPIAVIG LGCRFPGGDG
LDGNITGPDA YWRFLMEGRS AVRQVPEERW ESFQINTPEA AAALAGTTRW GAFLRDLDAF
DAEFFEISPS EADKMDPQQR LLLEVTQEAL EHAGIPTHTL RHSQTGVFAA ACLGEYGYLS
TVDLGDVDSW SGTGGALSII ANRVSYYFDL RGPSVTIDTA CSSSLVTIHL ACQSLRSGDS
NMALAAGVNL LLSPAVTRSF DQLEAMSRTG QCHAFDAGAD GFVRGEGCGV TVLKRLSDAQ
RDGDRILAVI RGSAVNQDGR SNGLMAPNPA AQMAVLRSAY SAAGVEPRDV DYVETHGTGT
LLGDPIEARA LGTVLGRGRA ADAPLLLGAV KSNLGHLEAA AGVAGFIKAV LALQHQQIPA
NLGYEKPNPH IPFDNLRLKV IAEHTEWPAP AGRPRRAGVS SFGFGGTNAH VVIEQAPPKA
PATNGQGEPA VTTLVVSGRT AERIASEAGM LAEWMAGPEG SLASLPEVAH TLNHHRSHYN
KFATVAARDR DQAIAGLRAL AAGQTAPGVV GAPTGARKRG TVFVYSGQGS QWPGMARQLL
ADEPAFANAL AEIEPVFVEQ VGFSLRDVIA GGETVSGDAQ VQPVLMGLQL ALTELWRSYD
VHPDAVIGHS MGEVTAAVVA GALSLADGLK VIAARSSIMS RLAGQGAVAL VELDPEAAAA
FIADYPSVEV AGFVSPRQTV VAGLPEQVDA VIAAVTAQEK FARRVNMEVA SHTALMDPVL
PDLREALAGV TPRTPNIPFL STVTEPDGEP ALDADYWVAN VRQPVKFSQA VTAAAQEIGT
FIEVSANPIL TYAINDTLSS ASHVSLGTLA RDADDTLTFH TALNATFTGH PPVTPHHGEP
HIQLPTTPWH HTHHWAIRKH TASGATAPRP GTVLGSHTAV AGTQPGHLWQ ARLAPQAKPY
PQPHKFAGVE IVPLSVLLQT LSLAAAESGA RAVADVRFDF PITVDAPRVV QVVSDGETIT
VSSSTAAAGS DDSAQRWIRH LTARVAHRVA DSPATAGTAQ SSGYDPSALA ELHNAWGIDG
MAYPWTVASH ESAPGELRTV IDLTPGSLVG LLDAAVNLGR LVDSSSPGLM VPSAAESVRF
GDDATGTGGV ITARSRGRDG DDLLVDISIG GAGGAEYAHI TGLRYTPVEI GTVTTSAAAD
PQRVAHRLDW QPWTPAADAG PDTGSVAVIG DDDVAAAVRG AVAANGHAVA EIPDARFVVY
VADVGDVDSD QDVAVRLTTE VADLVGTLAE RDPRNPATLW IVTRGVYESA TAAALPQSTL
WGLAGVVGAE QPQLWGGLVD LAGEDPAGSA EALAALLPTP VKSVAILRDG QLRTSVLAEF
TEAPARETLR CRPDAAYLIT GGMGVLGLLM ADWLADRGAR RVVLAGRTPL PPRRDWDDES
IDADTRHKIA AIRALELRGV SVDTVALDVG SREALTAVLD KRDGDGAPPI RGVIHAAGMT
EAQLLTEIEA DRVHRTVWPK IAGAKVLDEL FPPGSLDFLY LAASAGAVFG IPGQGAYAAG
NAYLDALARS RHHRGDNTVS LDWVAWQGLG FGSEAQVVVS ELERVGSRPV VPAEAFAAWD
FVTRFDVAQV VMAPMQSAED AAAVTADTHR APTRDWTAMA PDELLAELQD GLRGILATEL
RLPESDVHTD RPFAEMGLNS VMAMSIRREV ERLVGLELSA TMLFNHPTIE SFASYLAQQL
APETGGDDEV ADDSGGSLLD SLFDSVEN
|
|---|
| |