Gene Mvan_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3087 
Symbol 
ID4646993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3253231 
End bp3253647 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content69% 
IMG OID639806564 
ProductCopY family transcriptional regulator 
Protein accessionYP_953895 
Protein GI120404066 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.449228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC TGACGAGGCT CGGGGAACTC GAGCGTTCCG TCATGGACCA CCTGTGGTCC 
GCAGGCGAGC CGCAAACCGT GCGCCAGGTG CATGAAGCCC TGGCCGCCCA CCGCGATCTC
GCCTACACGA CGATCATGAC CGTGCTGCAG CGCCTCGCGA AGAAGAACCT GGTGGTGCAG
CACCGCGACG ACCGCGCGCA CCGATACGCG CCGACCCACG GCCGCGACGA ACTCGTCGCG
GGGCTGATGG TGGATGCGCT CGACCAGGCC GCCGATTCGG GTAGCCGGGA GGCCGCACTC
GTGCATTTCG TCGAGCGGGT CGGGGCAGAT GAGGCGGCTG CATTGCGCCG CGCGCTCGCC
GAGCTCGAAG ACAAGCACCG CACCGGAGGA CCGGCTGGCG ATCCGGGTAC CGCCTGA
 
Protein sequence
MAKLTRLGEL ERSVMDHLWS AGEPQTVRQV HEALAAHRDL AYTTIMTVLQ RLAKKNLVVQ 
HRDDRAHRYA PTHGRDELVA GLMVDALDQA ADSGSREAAL VHFVERVGAD EAAALRRALA
ELEDKHRTGG PAGDPGTA