Gene Mvan_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3078 
Symbol 
ID4646984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3245683 
End bp3247056 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content67% 
IMG OID639806555 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_953886 
Protein GI120404057 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.162743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATC CCGGAGCCAC TCCATCCGAT CGCCACAAGG TGGTGATCAT CGGATCGGGA 
TTCGGTGGGT TGACCGCAGC CAAGACCCTG AAGCGGGCAG ACGTCGACAT CAAGTTGATC
GCCCGCACCA CCCACCACCT TTTCCAGCCG CTGCTCTACC AGGTCGCGAC CGGCATCATC
TCGGAAGGCG AGATCGCCCC CGCGACCCGA GTCATCCTGC GCAACCAGAA GAACGCCCAG
GTGCTGCTCG GCGACGTCAC CGGCATCGAT CTGCAGACCA AGACCGTGCG CTCGGAGTTG
CTCGGGCACA CCTACGTCAC ACCGTTCGAC AGCCTGATCG TCGCGGCGGG TGCAGGCCAG
TCCTACTTCG GCAACGACCA CTTCGCCGAG TGGGCGCCCG GCATGAAATC CATCGACGAC
GCGCTGGAAC TTCGTGGGCG CATCCTCGGC GCGTTCGAGC AGGCCGAGCG GTCCAGCGAT
CCGGCCCGCC GGGAGAAGCT GCTGACGTTC GTCGTCGTGG GCGCAGGTCC GACCGGCGTC
GAAATGGCCG GCCAGATCGC CGAATTGGCC GACCACACAC TCAAAGGCGC CTTCCGCCAC
ATCGATTCGA CCAAGGCGCG GGTGATCCTG CTCGACGCCG CGCCCGCCGT GCTGCCACCG
ATGGGTGAGA AGCTCGGCAA GAAGGCGCAG GCCCGGCTGG AGAAGCTGGG TGTCGAGATC
CAGCTCAACG CGATGGTCAC CGACGTCGAC CGCAACGGCA TCACCGTCAA GGACCCCGAC
GGGACTATCC GCCGGATCGA GGCGGCGTGC AAGGTGTGGT CGGCCGGTGT GTCGGCAAGC
CCGCTGGGCC GGGACCTGGC CGAGGGGTCC GGCGTCGAAC TCGACCGTGC CGGCCGGGTG
AAGGTGCTGC CCGACCTGTC GCTCCCCGGC CACCCGAACG TTTTCGTCGT CGGTGACATG
GCGGCCGTCG AGGGGGTGCC CGGCATGGCG CAGGGCGCGA TCCAGGGTGG GAAGTACGCC
GCAAAGGCGA TCGCCGCCGG GCTCAAGGGC GCCGATCCCA CAGAGCGTGA ACCGTTCAAG
TACTTCGACA AGGGCTCGAT GGCCACCGTG TCCAGGTTCA GCGCGGTCGC CAAGATCGGG
CCACTGGAGT TCGAGGGCTT CGTCGCCTGG CTGGCCTGGC TGGTGCTGCA CCTGGTGTAC
CTGGTCGGCT TCAAGACCAA GATCGTCACG CTGCTGTCGT GGACGGTGAC GTTCCTGTCG
ACCAAGCGTG GTCAGCTGAC CATCACCGAG CAGCAGGCCT ACGCACGGAC ACGCATCGAG
GAACTCGAGG AGATCGCCGC GTCCGTCCAG GAGACCGAGC GGGCCGCCAG TTAG
 
Protein sequence
MSHPGATPSD RHKVVIIGSG FGGLTAAKTL KRADVDIKLI ARTTHHLFQP LLYQVATGII 
SEGEIAPATR VILRNQKNAQ VLLGDVTGID LQTKTVRSEL LGHTYVTPFD SLIVAAGAGQ
SYFGNDHFAE WAPGMKSIDD ALELRGRILG AFEQAERSSD PARREKLLTF VVVGAGPTGV
EMAGQIAELA DHTLKGAFRH IDSTKARVIL LDAAPAVLPP MGEKLGKKAQ ARLEKLGVEI
QLNAMVTDVD RNGITVKDPD GTIRRIEAAC KVWSAGVSAS PLGRDLAEGS GVELDRAGRV
KVLPDLSLPG HPNVFVVGDM AAVEGVPGMA QGAIQGGKYA AKAIAAGLKG ADPTEREPFK
YFDKGSMATV SRFSAVAKIG PLEFEGFVAW LAWLVLHLVY LVGFKTKIVT LLSWTVTFLS
TKRGQLTITE QQAYARTRIE ELEEIAASVQ ETERAAS