| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3010 |
|---|
| Symbol | |
|---|
| ID | 4648538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3177823 |
|---|
| End bp | 3180087 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639806490 |
|---|
| Product | formate dehydrogenase |
|---|
| Protein accession | YP_953821 |
|---|
| Protein GI | 120403992 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.189553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.616096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC AGACCGGCCA GTGGCAGCCC ACCGCCTGCA TCCTGTGCGA ATGTAACTGC
GGCATCGTGG TGCAGGTGGA AGGTCGCGCC CTCGCGCGCA TCCGGGGCGA CAAGTTGCAC
CCGGCCTCAC GCGGATACAC CTGCAACAAG GCGCTGCGGT TGGACCACTA TCAGAACAAC
CGCAACCGCC TGACCTCGCC GATGCGGCGC AAGCCCGACG GCAGCTACGA GGAAATCGAC
TGGGACACCG CAATATCGGA GATCGCCGCA GGCTTTCGCG GCATCGCCGA CACGCACGGC
GGCGACAAGA TCCTCTACTA CGGTGGCGGC GGTCAGGGTA ACCACCTGGG CGGGGCCTAC
AGCGGCGCCT TCCTCAAGGC ACTGGGCTCG CACTACCGCT CCAACGCCCT GGCCCAGGAG
AAGACCGGCG AGTACTGGAT CGACGCCCAC TTCTACGGCG GTCACACCCG GGGAGAGTTC
GAGCACGCCG AGGTGTCGGT CTTCGTCGGC AAGAACCCGT GGATGTCGCA GAGCTTCCCG
CGGGCCCGCG TGGTGCTCAA CGAGATCGCC AAGGACCCGG CCCGGTCGAT GATCGTGATC
GACCCCGTCC TCACCGATAC CGCAAAGATG GCCGACTATC ACCTGCGGGT GCGGCCCGGC
ACCGACGCCT GGTGTCTCGC CGCTCTGGCT GGTGTGCTGG TACAGGAGAA GCTGTGCGAT
GAAACGTTTC TCGCTGACCA CGTCACCGGC GTGCAGGCCG TGCGTACGGT GCTGGCCGAG
GTGCCCGTCG CCGACTACGC CCAGCGGTGC GGCGTCGACG AGGAGCTTTT GCGGGCAGCC
GCGCGCCGGA TCGGTGCCGC CGGCAGTGTC GCGGTGTTCG AGGATCTCGG CGTCCAGCAG
TCGCCGAACA GCACGCTGTG CTCGTATCTG AACAAGATGC TGTGGATCCT GACCGGCAAC
TTCGCCAAAC GCGGTGCCCA GCACCTGCAT TCGTCGTTCG CGCCGCTGTT CCGGCCCGGC
GGGGTGGGGC GCACCCCGGT CACGGGCGCC CCGATCATCG GCGGGCTGAT GCCCAGCAGC
GTGATCCCCG AGGAGATCCA CACCGATCAC CCCGACCGTT TCCGCGCCAT GATCGTCGAA
AGCAGCAATC CGGCGCATTC ACTGGCGGAC TCAGCTGCCG TCCGGCGCGC CTTCGCCGAC
CTCGAGCTGC TGGTGGTGAT CGACGTGGCG ATGACCGAGA CTGCGCGGCT GGCGCACTAC
GTGCTCCCCG CCGCCACCCA GTTCGAGAAG GCCGAGGCGA CGTTCTTCAA CCTCGAGTTC
CCGCACAACA CCTTCCACCT GCGCCACCGC CTGATGGAGC CGCTGCCCGG CACGCTGCCC
GAGCCGGAGA TCTGGGCCCG CCTGATGCGA GAGCTCGACG TGGTCGACGG TGCGGAGCTC
GCGCCGCTGC GCCGAGCCGC AGCGCAGGGG CTACCTGAGT TCACCGAGGC GTTCCTCGCG
GCGGTCGGGG CCAACCCCGG ACTCGGCAAG GTGCTGCCGT TCGTGTTGCA CGAGACGTTG
GGCCCGACCC TGCCCGAGGG GCTCTCCGGC GCCGCAGCGT TGTGGGGACT GGCGCAGAAG
ACCGCGATGA CGTATCCGGA CGCGGTGCGG CGGGCCGGAC ATGCGGACGG CAACGCGCTG
TTTTCCGCGA TCCTCGACGG CAGGTCGGGT GTGACGTTCA CCGTGCACGA TTACGAGGAC
GATTTCACGC TGATCACGCA CCCGGACCGC AAGATCGCGC TGGACATACC GGAGATGCTC
GCCGAAGTCG CGGCGCTGTC CGCCGCACCG GCTGCCCGCA CCACGGCCGA CTTCCCGATC
GTGTTGTCCG CAGGCGAACG CCGCGCCTAC ACCGCCAACG ACATCATGCG CGACCCGGCG
TGGCGCAAGC GCGACAGCGA CGGCGCGCTG CGGGTCAGCG TCGAGGATGC CGCCGCGCTC
GGCCTCAGCG ACGGCGGCAG GGCCCGCATC ACCACCGCGG CGGGCAGCGC CGAGGCCACC
GTGGAGATCA GCGCATCGAT GCTGCCGGGG CACGCCTCAC TGCCCAACGG GTACGGCGTC
GATTTCGCCG ACGGCGCGGG CGGGGCCGCG GTGCCCGGGG TCGCGCCGAA CGCGCTGACG
TCGAGCGCAT GGCGCGACGC GTACGCCGGA ACGCCGTGGC ACAAACACGT GCCCGCCCGG
ATCGAGAAGG TGTTAGCCGA CGACGGGCTC CGGGCAGTCG GCTAG
|
|---|
| Protein sequence | MTEQTGQWQP TACILCECNC GIVVQVEGRA LARIRGDKLH PASRGYTCNK ALRLDHYQNN
RNRLTSPMRR KPDGSYEEID WDTAISEIAA GFRGIADTHG GDKILYYGGG GQGNHLGGAY
SGAFLKALGS HYRSNALAQE KTGEYWIDAH FYGGHTRGEF EHAEVSVFVG KNPWMSQSFP
RARVVLNEIA KDPARSMIVI DPVLTDTAKM ADYHLRVRPG TDAWCLAALA GVLVQEKLCD
ETFLADHVTG VQAVRTVLAE VPVADYAQRC GVDEELLRAA ARRIGAAGSV AVFEDLGVQQ
SPNSTLCSYL NKMLWILTGN FAKRGAQHLH SSFAPLFRPG GVGRTPVTGA PIIGGLMPSS
VIPEEIHTDH PDRFRAMIVE SSNPAHSLAD SAAVRRAFAD LELLVVIDVA MTETARLAHY
VLPAATQFEK AEATFFNLEF PHNTFHLRHR LMEPLPGTLP EPEIWARLMR ELDVVDGAEL
APLRRAAAQG LPEFTEAFLA AVGANPGLGK VLPFVLHETL GPTLPEGLSG AAALWGLAQK
TAMTYPDAVR RAGHADGNAL FSAILDGRSG VTFTVHDYED DFTLITHPDR KIALDIPEML
AEVAALSAAP AARTTADFPI VLSAGERRAY TANDIMRDPA WRKRDSDGAL RVSVEDAAAL
GLSDGGRARI TTAAGSAEAT VEISASMLPG HASLPNGYGV DFADGAGGAA VPGVAPNALT
SSAWRDAYAG TPWHKHVPAR IEKVLADDGL RAVG
|
|---|
| |