Gene Mvan_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2978 
Symbol 
ID4645106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3149724 
End bp3150500 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content74% 
IMG OID639806458 
ProductO-succinylbenzoate-CoA synthase 
Protein accessionYP_953789 
Protein GI120403960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.11331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAACAT TCATCGATTT CGACGACGCC CCGGTGTTCG CCGTCCCGAC CGCCACAGGT 
GTTCGGGAGG GAGCGCTGCT CGACGGACCG CAGGGCTGGG GGGAGTTCAG CCCGCCCGCC
GATGCCGACG ACGAGCTCGC GGCGCGTTGG TTGACCGCAG CCATGGAGCC GAGCACGGTC
GGCTGGCCCG ATGCCGTGCG GGGCAGGGTG CCGGTCACCG ACGGTGCGGC GCGTGCCGTG
ATCGAGGTCG ACAACGTCGA CGCGGCCGTC GCCCGGATCA CCCGATCAGA TGCCGTCGAG
TTGGTGGAAC TGGTGTGCCG CAGCGCTGCC GACGCCGGGG CCGTCCGGCA GCGCGTCGAC
GTGCCCGTCG CCGTCGATGC GGAGTTGTTG GCCCAGGATC CTCGGTGCGC CGACATCGCG
ATCCTGCGCT GCGGTCCGCT CGGGGGAGTG CGCCGCGCGC TGCGGCGCGC CGAGAGGCTG
GGCCTGCCGG CACTGGTGAA CTTCACCGGC GCGACGAGCA TCGGCCTGGC CGCCGACGTC
GCCCTGGCCG CGGCGCTGCC CGATCTGCCA TTCGCGTGCG GCCCGGTTCC GGAGTGGCTG
ACCCACGCCG ACGTCGTCTC GGACTCGCGG ACCCTGGTGC CCGTCGACGG TTTCCTGCCC
GCGGCGCCGA TGCCTGCGGG ACCCGACCCC GGCCGCCTCG CGCGCTTCAC GGTCACCGAC
GCCGCGACGG TCGGCCGGTG GCGCGACCTG CTGCACCGAG CCGCGGCACT GATCTAG
 
Protein sequence
MRTFIDFDDA PVFAVPTATG VREGALLDGP QGWGEFSPPA DADDELAARW LTAAMEPSTV 
GWPDAVRGRV PVTDGAARAV IEVDNVDAAV ARITRSDAVE LVELVCRSAA DAGAVRQRVD
VPVAVDAELL AQDPRCADIA ILRCGPLGGV RRALRRAERL GLPALVNFTG ATSIGLAADV
ALAAALPDLP FACGPVPEWL THADVVSDSR TLVPVDGFLP AAPMPAGPDP GRLARFTVTD
AATVGRWRDL LHRAAALI