Gene Mvan_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2968 
Symbol 
ID4645096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3139506 
End bp3140135 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content61% 
IMG OID639806448 
ProductTetR family transcriptional regulator 
Protein accessionYP_953779 
Protein GI120403950 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.305044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.85525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCAA GTAAGCACAT TTCAGAGCGC CGCAAGCTGC CGCAGCAGCA GAGGTCCCGC 
GAGATGGTCG CAAAAATAGT GGCATCCACG GCGAGCTTGC TGCTCAAGAC CGACCCCGAT
CAGTTGACCA CCAACCTAAT TGCCGACAAG GCCGGCGTCA GCAAGGGTTC GATCTATCAG
TACTTCGCCG ACAAGGACGC GATCATCAAC GCCGCGATCG AACAGCTGGC CGCCCAGCAG
GCGCCGGTGA TCGAGGAGAT GCTCAGGTCG GTCACCCTCG TCCAGCCGGA GGCGGCGATG
CAGTCCTCGA TCGACATCCT CATCGACGTC ACGATCGCCA ATCGGCGCTT GATCCGCTAC
CTCGCCGAGC GACCTGACTA CACAAGGACC TTCGAGAACA TCTCGGGCCT CAACGCAACG
CTGCTCGCGA TGGCAACGCT GCATATGGGC CACTACCGCG ACCAGTACCG CCACGAGCTG
AGTCCGCGCG CGTTGGCATG GCTGTTTTTC AACATGGCGG TGTCCACCAC CTTGCGCTAC
ATCGAATCCG ACGATCCGAT CAGCCTGGAA GAGCTGCGCA GCGGCCTCAA GTTCGCCTCC
GCGGGACTGT TGAGCGGCAG CAAGACCTAA
 
Protein sequence
MSSSKHISER RKLPQQQRSR EMVAKIVAST ASLLLKTDPD QLTTNLIADK AGVSKGSIYQ 
YFADKDAIIN AAIEQLAAQQ APVIEEMLRS VTLVQPEAAM QSSIDILIDV TIANRRLIRY
LAERPDYTRT FENISGLNAT LLAMATLHMG HYRDQYRHEL SPRALAWLFF NMAVSTTLRY
IESDDPISLE ELRSGLKFAS AGLLSGSKT