Gene Mvan_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2947 
Symbol 
ID4649153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3120209 
End bp3120997 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID639806428 
Productputative integral membrane protein 
Protein accessionYP_953759 
Protein GI120403930 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.704391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.150351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTG CTCTCGCAGT CGGTTACGGC GCCGCCTGCT ATCTGCTCTT TCTGGCGGTA 
TTCCTGTACG CCATCGGATT CGTCGGCGAT GTGGTGGTTC CGCGCAGTGT CGACCATGCG
GTCGACGCGC CGCTCGGGCA GGCGCTGATC GTCAACCTGT CGCTGCTGAC CCTCTTCGCC
GTGCAGCACA GTGTGATGGC CCGCCCTGCG TTCAAACGGT GGTGGACGCG CTACATTCCG
CCGCCGGTCG AACGCAGCAC CTACGTGCTC CTGGCCAGTC TTGCCCTCGC ACTGCTGTTC
TGGCAGTGGC GGAAGATCCC TTTCGTCGTC TGGGACGTGA CGTATCAGCC CCTCCGGGTC
GCGGTGTGGG CGCTGTTCTG GCTCGGTTGG GCGATCGTGC TCGCCGCGAC GTTCATGATC
AATCACTTCG AGCTGTTCGG GCTGCGCCAG GTGATCGCCA ACTGGCGGGC CCAGCCTGAC
GCCGAGACCG GATTCCGGGC CACGATGTTC TACCGCGTGG TGCGGCACCC GCTGATGCTG
GGATTCCTCA TCGCCTTCTG GTCCGCGCCC ACCATGACGG CCGGGCACCT GCTGTTCGCG
ACGGCCACGA CGGGCTACAT CCTCATTGCG CTGCAGCTCG AGGAACGTGA CCTGCTGGCG
ACGTTGGGAG CCCGCTATGC CGCGTACCGG CAGACGGTCC CCATGCTCGT GCCACGGCCC
CGGACACGCC GTCGCGCTCG CCGGCTTGAG GGCAGAGTTG ACACTGCGAG TTACGCGCCC
CGGAGGTGA
 
Protein sequence
MTRALAVGYG AACYLLFLAV FLYAIGFVGD VVVPRSVDHA VDAPLGQALI VNLSLLTLFA 
VQHSVMARPA FKRWWTRYIP PPVERSTYVL LASLALALLF WQWRKIPFVV WDVTYQPLRV
AVWALFWLGW AIVLAATFMI NHFELFGLRQ VIANWRAQPD AETGFRATMF YRVVRHPLML
GFLIAFWSAP TMTAGHLLFA TATTGYILIA LQLEERDLLA TLGARYAAYR QTVPMLVPRP
RTRRRARRLE GRVDTASYAP RR