Gene Mvan_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2946 
Symbol 
ID4649152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3119082 
End bp3120065 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content65% 
IMG OID639806427 
Productcation efflux protein 
Protein accessionYP_953758 
Protein GI120403929 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3965] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.457445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGG CGTCGCAATC GGCGGTCCTG GCGGCTGAAC GACGGAGCTT GTACACCTAC 
ATGGTCACGA TGCTGGGGCT CGCCGTCGTT GGCTTCGCCG TCTACGCCGT CACCAAGGTG
TCGGCCACAC AGCTCGACGG CGTCATCTCG CTGATCAATG CGGGCGCCGC GTTCATCGCC
GCGCGGCTGT CGGTGGCGTC GTCGCGGCCC CCGGATGCCG AAAACCCCTA TGGGCGGCTG
GCATTGGAAA ACCTCTATGC GCTGTTTCGG TCGTTGATGA TTCTCGGTGT GGTCGTCATC
GCAGTGGTCA CGAATTCGGT CAAAGTGATC GACTATCTGG TCACCGGCAA CGGCACTGAG
CCCGAGTTCG GTGTGGCCGC CGTGTACACC GCTGCCGTCG CGGCGATCGG GCTCGGACTC
ATGTGGAACC ACCGACGCAA TAACCGCTCG GTCGGCGGCG CGTCGGCTCT GCTGCGCGTC
GAGGCGAACG CCGCCAAGAT GGCCAGCTTG ATCAGCGCCG GGATCTGTGG CTCATTGATC
TTGGTTGCGG TCATCCCGGA AGGGACGGTG CTGACCTCGG AACGATTCAA CATCAAGGAC
ATCGCCGACA GCATCATCGT GCTCATTCTG TGCGCGGTAC TGGTCGCCGA CCCTGTCCGC
GAGATCCGCC TCGAGTTCGG GCGCCTCTCC GGACGGCGCT CCGACCCCGA CCTCGATGCG
GCGGTGCGCG CGGCTATCGA GACGGTATCC GCCGAGCACC GCGGTGAACT CGACCATGAG
CTCACCCTCG TCGATGCGCT GGCCATCAGC AGGGGCAAAA CCACCGAGGT CGACCTCCGG
GTTTCCTACA CCGGCGCGAT GACGGTGGCC GACCAGGACC GCATTCGAGC GCACACCTTG
GAAGAACTCG GCGCGCGCGT CGGGCCGATT CGGCTGACCC TGGTGTTCAG CGCCTACCCG
ATTCACGCCA TCCCGAGCCT GTAG
 
Protein sequence
MAMASQSAVL AAERRSLYTY MVTMLGLAVV GFAVYAVTKV SATQLDGVIS LINAGAAFIA 
ARLSVASSRP PDAENPYGRL ALENLYALFR SLMILGVVVI AVVTNSVKVI DYLVTGNGTE
PEFGVAAVYT AAVAAIGLGL MWNHRRNNRS VGGASALLRV EANAAKMASL ISAGICGSLI
LVAVIPEGTV LTSERFNIKD IADSIIVLIL CAVLVADPVR EIRLEFGRLS GRRSDPDLDA
AVRAAIETVS AEHRGELDHE LTLVDALAIS RGKTTEVDLR VSYTGAMTVA DQDRIRAHTL
EELGARVGPI RLTLVFSAYP IHAIPSL