| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2880 |
|---|
| Symbol | |
|---|
| ID | 4645660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3051414 |
|---|
| End bp | 3052001 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639806361 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_953692 |
|---|
| Protein GI | 120403863 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGGA TAGAAGCCGA TACCAGAGAG CATCTACTGA CCGTCGCCGA GCGGTTGTTC
CTCGACGCCG GCTACGAGAA CGTGTCGGTG CGCGCGGTAT GCGCGACGGC TGGCGTAAAC
CCGGCAGCGG TGCACTACCA CTTCGGCTCG AAGGTCGGCC TCGTCTCGGC GTTGTTGGAA
GCCCGACTGG GGCCGTTGTG GGAGGACGCC CTGACCGAAG CGGCAGGCGA AGGTCCGGCC
GGCATCTCAG ATGCGGTGCG GATCGTCGTC GAACCGTTGG TCGAGTTGGC CGGGGACCCG
GCAGGGCGGC TCTATCTACA CCTGCTGTCG CGTCTGCTGC TTGCTCGCGT CGAGCTCAGC
TGGACACGAC GATGGTTCGC GGTGGCGCCG TGGGTCGCGC TATTGCGACG CCATCTTCCC
GAACTGTCTG AACGTGACGC CGAAGCCCGT TGGATGCTGG CATTCGAACT GATCTTCACT
CAGTTCGGCG ACCCACTGGC GGGGGATCGG CGGTTGTCCG CCCGCCGAGT CCAGACGCTG
CAAGCCTTTG TCGCAGCCGG GTTATCCGCA CCGGTGGAGT CCCGGTGA
|
|---|
| Protein sequence | MSRIEADTRE HLLTVAERLF LDAGYENVSV RAVCATAGVN PAAVHYHFGS KVGLVSALLE
ARLGPLWEDA LTEAAGEGPA GISDAVRIVV EPLVELAGDP AGRLYLHLLS RLLLARVELS
WTRRWFAVAP WVALLRRHLP ELSERDAEAR WMLAFELIFT QFGDPLAGDR RLSARRVQTL
QAFVAAGLSA PVESR
|
|---|
| |