Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2816 |
Symbol | trpC |
ID | 4646473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2982529 |
End bp | 2983347 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639806297 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_953629 |
Protein GI | 120403800 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.07226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.927217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCGG CGACCGTGCT CGACTCCATC ATCGAAGGGG TCCGCGCTGA CGTTGCCGCT CGCGAAGCCG CCGTCAGCAT GGACGAGGTC AAGGAGCAGG CCAAGCGTGC TCCGGCTCCA CTTGACGTGA TGGCAGCGTT GCGTGCTTCC GGGATCGCGG TGATCGCCGA GGTCAAGCGG GCCAGTCCGT CGCGCGGTGC GTTGGCCTCG ATCGCCGACC CCGCCGAGCT CGCCCGCGCC TACGAGGACG GCGGTGCGCG GATCATCAGC GTGCTCACCG AGCAGCGCCG CTTCAACGGG TCGCTCGACG ACCTCGACGC GGTCCGCGCC GCGGTGTCGA TTCCGGTCCT GCGCAAGGAT TTCATCGTGC GGCCGTACCA GATCCACGAA GCGCGCGCCC ACGGTGCGGA CATGCTGCTG CTGATCGTCG CGGCACTCGA ACAGCCGGTG CTGGAGTCGC TGCTCGAGCG CACCGAGTCG CTGGGGATGA CCGCGCTGGT CGAGGTGCAC ACCGAGGAAG AGGCGGACCG GGCTCTGCAG GCCGGCGCGT CGGTGATCGG GGTGAACGCC CGCGACCTCA AGACGCTGGA GGTCGACCGG GACTGCTTCG CGCGGATCGC TCCCGGGCTG CCGAGCAACG TCATCCGTGT CGCGGAGTCC GGTGTCCGGG GAACCGCCGA CCTGCTCGCC TACGCTGGTG CCGGCGCCGA CGCCGTGTTG GTCGGCGAGG GTCTGGTCAC CAGCGGGGAT CCGCGCAGCG CCGTCGCCGA CCTGGTCACC GCAGGTGCCC ATCCGTCGTG CCCGAAGCCC GCACGTTAA
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Protein sequence | MGSATVLDSI IEGVRADVAA REAAVSMDEV KEQAKRAPAP LDVMAALRAS GIAVIAEVKR ASPSRGALAS IADPAELARA YEDGGARIIS VLTEQRRFNG SLDDLDAVRA AVSIPVLRKD FIVRPYQIHE ARAHGADMLL LIVAALEQPV LESLLERTES LGMTALVEVH TEEEADRALQ AGASVIGVNA RDLKTLEVDR DCFARIAPGL PSNVIRVAES GVRGTADLLA YAGAGADAVL VGEGLVTSGD PRSAVADLVT AGAHPSCPKP AR
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