Gene Mvan_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2816 
SymboltrpC 
ID4646473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2982529 
End bp2983347 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content70% 
IMG OID639806297 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_953629 
Protein GI120403800 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.07226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.927217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCGG CGACCGTGCT CGACTCCATC ATCGAAGGGG TCCGCGCTGA CGTTGCCGCT 
CGCGAAGCCG CCGTCAGCAT GGACGAGGTC AAGGAGCAGG CCAAGCGTGC TCCGGCTCCA
CTTGACGTGA TGGCAGCGTT GCGTGCTTCC GGGATCGCGG TGATCGCCGA GGTCAAGCGG
GCCAGTCCGT CGCGCGGTGC GTTGGCCTCG ATCGCCGACC CCGCCGAGCT CGCCCGCGCC
TACGAGGACG GCGGTGCGCG GATCATCAGC GTGCTCACCG AGCAGCGCCG CTTCAACGGG
TCGCTCGACG ACCTCGACGC GGTCCGCGCC GCGGTGTCGA TTCCGGTCCT GCGCAAGGAT
TTCATCGTGC GGCCGTACCA GATCCACGAA GCGCGCGCCC ACGGTGCGGA CATGCTGCTG
CTGATCGTCG CGGCACTCGA ACAGCCGGTG CTGGAGTCGC TGCTCGAGCG CACCGAGTCG
CTGGGGATGA CCGCGCTGGT CGAGGTGCAC ACCGAGGAAG AGGCGGACCG GGCTCTGCAG
GCCGGCGCGT CGGTGATCGG GGTGAACGCC CGCGACCTCA AGACGCTGGA GGTCGACCGG
GACTGCTTCG CGCGGATCGC TCCCGGGCTG CCGAGCAACG TCATCCGTGT CGCGGAGTCC
GGTGTCCGGG GAACCGCCGA CCTGCTCGCC TACGCTGGTG CCGGCGCCGA CGCCGTGTTG
GTCGGCGAGG GTCTGGTCAC CAGCGGGGAT CCGCGCAGCG CCGTCGCCGA CCTGGTCACC
GCAGGTGCCC ATCCGTCGTG CCCGAAGCCC GCACGTTAA
 
Protein sequence
MGSATVLDSI IEGVRADVAA REAAVSMDEV KEQAKRAPAP LDVMAALRAS GIAVIAEVKR 
ASPSRGALAS IADPAELARA YEDGGARIIS VLTEQRRFNG SLDDLDAVRA AVSIPVLRKD
FIVRPYQIHE ARAHGADMLL LIVAALEQPV LESLLERTES LGMTALVEVH TEEEADRALQ
AGASVIGVNA RDLKTLEVDR DCFARIAPGL PSNVIRVAES GVRGTADLLA YAGAGADAVL
VGEGLVTSGD PRSAVADLVT AGAHPSCPKP AR