| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2762 |
|---|
| Symbol | |
|---|
| ID | 4646344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2924122 |
|---|
| End bp | 2926002 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639806243 |
|---|
| Product | methylmalonyl-CoA mutase, beta subunit |
|---|
| Protein accession | YP_953575 |
|---|
| Protein GI | 120403746 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
|---|
| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0864334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGC AGAAACCCAG CGCCGGCTCT GCCGGAGGAG TAATCGACTC CGATCTGGAC
CGATGGCGCT CCGCTGTGGC GGGCGTTCTG GCGAAGTCCT TGAAGCGCGA TCCCGCCGAC
CTGCCCTCCG AGCCCGAGCG ACTGCTCGAT TCGGCGACCT ACGACGGTTT CCCGATCAGG
CCGCTCTACA CCGGCGCCGA CGAGCTTGCC GAGCCGGCGC TGCCCGGCCG GTGGCCGTTC
GTGCGCGGCG GTGATGCGCT GCGGGACGTG AAGTCCGGCT GGAAGGTCGC CGAGGCGTTC
CCCGCCGAGG CGGGATCTGT CGCCGAGGCC AACGGCGCGA TCCTCGTGGG CCTGACCGAG
GGCGTCAGCG CGCTGGTGCT ACGCGTCGGC GACGAGGCGG GGGCGGTCGC ACCCGGTGAT
CTCGGGCGCC TGCTCGACGG GGTCTACCTG GACCTCGTGC CGGTGGTCGT GGACACCGCC
GGGGACGGCT CGGCCCACCG CGCGGCCGCC GACGCGCTGC TGGCGATGCT GACCGGTCTC
GACGGCGATC AGCGCTCACG GCTGTCGATC GACCTCGGCG CCGATCCGCT CACCGCTGCG
ATGGCGGGCC GTCCGGCGCC CGAGTTCGCC GACGTGGTCG CGACTGCCGA AGACGCCGTC
GCGTACGACG GCCACGTGCG GACGATCACG GTGGACGGCC CGACATTCCA CAATCTGGGC
GCGAGCGCGT CCTGGGAGCT CGGCGCCGCC GTCGCCGCCG GCGTCGCCTA CCTGCGACTG
CTCACCGATG CGGGGCTGTC GACGGCCGAC GCGCTCAGAC AGATCAGCTT CCGCTTCGCT
GCCGACGATG ACCAGTTCAC GACGATCGCC AAACTTCGTG CTGCGCGCCG GCTCTGGGCC
CGGGTGGCCG AGGTGGTCGG TGAACCGGCG GCCGGGGCGG CCACGCTGCA CGCGACGACC
TCGCTGCCGA TGATGACGGC CCGCGACCCC TGGGTGAACA TGCTTCGGAC CACCGTCGCG
GCGTTCGCGG CAGGTGTCGG AGGAGCCGAC ACCCTCCTGG TGCATCCGTT CGACGTCGCG
ATCGACGGCG GATTCCCCGG TACCGCACGC AGTTTCGCGC GCCGCATTGC CCGCAACACC
CAGTTGCTGC TGCTCGAGGA ATCCCATCTC GGTCGGGTGC TCGACCCGTC GGGCGGGTCC
TGGTTCATCG AGGACCTCAC CGGTCAACTC GCCGGGCAGG CGTGGCAGAA GTTCCAGGAG
ATCGAGGCCC ACGGCGGATT CGTCGCCGCG CGTGAGCACA TCAGCGCCGG GATCGCCGAG
GTCGCAGCCC GGCGCGCCGA CGACGTCGCG CACCGGCGCA CGTCTGTCAC GGGTGTCAAC
GAGTTCCCGA ACCTCGGGGA AGTGCCGCTG CCGCAGGGTG ATCCGCTGCC CCAGGTGCGG
CGGTACGCGG CGGCTTTCGA AGCGCTGCGC AACCGTTCGG ACGTCTATCT GGAGAAGACA
GGGGCCCGGC CCAAGACGTT GCTGTTGCCG CTCGGCCCGC TCGCCGAGCA CAACATCCGG
ACCACCTTCA CTGCGAACCT GCTCGCCTCG GGCGGGATCG AGGCTGTCAA CCCGGGTCCC
CTGGACGTCG CCGGTGTGGC CGCCGCGGTC GCCGAGTCCG GTGCCACTGA GATCGCCGTG
ATCTGCGGGA CCGACGCCCG GTACGCCGAC GAGGTTTCGG GTGTTGTCGA GGCCGCGCGG
GCGGCCGGGG TGCGTCACAT CCTGTTGGCG GGGCCGGAGA AGGCCGTCGC AGAAGCTGAT
TCGAAACCGG ACGGATACCT CACCGCGAAG ATCGACGCGG TGAGCGCGCT GTCGGACCTG
CTGACCCGAT TGGGGGCATG A
|
|---|
| Protein sequence | MAVQKPSAGS AGGVIDSDLD RWRSAVAGVL AKSLKRDPAD LPSEPERLLD SATYDGFPIR
PLYTGADELA EPALPGRWPF VRGGDALRDV KSGWKVAEAF PAEAGSVAEA NGAILVGLTE
GVSALVLRVG DEAGAVAPGD LGRLLDGVYL DLVPVVVDTA GDGSAHRAAA DALLAMLTGL
DGDQRSRLSI DLGADPLTAA MAGRPAPEFA DVVATAEDAV AYDGHVRTIT VDGPTFHNLG
ASASWELGAA VAAGVAYLRL LTDAGLSTAD ALRQISFRFA ADDDQFTTIA KLRAARRLWA
RVAEVVGEPA AGAATLHATT SLPMMTARDP WVNMLRTTVA AFAAGVGGAD TLLVHPFDVA
IDGGFPGTAR SFARRIARNT QLLLLEESHL GRVLDPSGGS WFIEDLTGQL AGQAWQKFQE
IEAHGGFVAA REHISAGIAE VAARRADDVA HRRTSVTGVN EFPNLGEVPL PQGDPLPQVR
RYAAAFEALR NRSDVYLEKT GARPKTLLLP LGPLAEHNIR TTFTANLLAS GGIEAVNPGP
LDVAGVAAAV AESGATEIAV ICGTDARYAD EVSGVVEAAR AAGVRHILLA GPEKAVAEAD
SKPDGYLTAK IDAVSALSDL LTRLGA
|
|---|
| |