| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2620 |
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| Symbol | |
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| ID | 4643390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 2768625 |
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| End bp | 2769395 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639806102 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_953434 |
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| Protein GI | 120403605 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.239755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAA CTGTTGTGGT GACCGGCGCG GGATCCGGTA TCGGACGAGC GATCGCCAAC
ACACTGGCGC AACGAAATTG GCGGGTGGTG GTCACCGACG TCAATGCCGC CGCCGCAAGC
GAGGTCGCAG CGGCACTGCC GAATCCGCCC GCAGGCCATG AATCCGCACA ACTGGACGTC
ACCTCCCCCG AGAACGCGGC CGCCGTGGCA TCCGACGTCT CGGAGCGGCT CGGGCTCGAC
GCGTGGGTGA GCAACGCCGG CATCTCGTTC ATGCACCGCT TCCTCGACGC CCCCATCGAG
CGCTACGAGC AGACCATGGA CGTGAATCTC AAGGGCGTGT TCGTGTGCGG GCAGGCCGCG
GCGCGGGAGA TGGTGCGCGC CGGCATTCCC GGGATGATCG TGAACACCGC CTCGATGGCG
GGCAAGCAGG GCCGGGTGCC GTTCCTGTCG GACTACGTCG CCTCGAAATT CGGGGTGGTC
GGGTTGACCC AGGCGATGGC CTACGAACTC GGCGAGCATG GCATCACAGT CAACTGCGTG
TGCCCTGGCT TTGTCGAAAC CCCCATGCAG TCAAGGGAAT TGCAGTGGGA GGCCGAGCTG
CGTGGCACCA CCCCCGACGG TGTCCGCGCC ATGATGATCG CCGACACGCC GCTGGGTCGC
CTTGAGCAGG CCGACGACGT CGCCCGCGCC GTGGCCTTCC TGCTCTCCGA CGACGCCCGT
TTCATCACCG GCGAAGCGCT CGCCGTCAAC GGCGGCGCCT ACATGGACTG A
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| Protein sequence | MTRTVVVTGA GSGIGRAIAN TLAQRNWRVV VTDVNAAAAS EVAAALPNPP AGHESAQLDV
TSPENAAAVA SDVSERLGLD AWVSNAGISF MHRFLDAPIE RYEQTMDVNL KGVFVCGQAA
AREMVRAGIP GMIVNTASMA GKQGRVPFLS DYVASKFGVV GLTQAMAYEL GEHGITVNCV
CPGFVETPMQ SRELQWEAEL RGTTPDGVRA MMIADTPLGR LEQADDVARA VAFLLSDDAR
FITGEALAVN GGAYMD
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