Gene Mvan_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2588 
Symbol 
ID4643833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2732028 
End bp2732984 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID639806070 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_953402 
Protein GI120403573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.307061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.59565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTC AGCGTCAGCT GGCACACTCG GTGCCGACCG GATCTACTGC GAGGAGGACA 
CCGGCCGTGC CGACGAACGA ACAACGGCGT GCGACAGCCA AACGCAAGCT TGAGCGTCAA
CTCGAGAATC GGGCCGAGCG TGAACGCAAG CGCCGCCTCT ACACGATCAT CGGGTCGGCG
GTGGCCGCGG TGGTCGTCAT CGCCGCCGTG GTCGCCACCA TCGTGATCAC CAACCGCGAC
TCGGGCACGC AGACCGCGTC CACCGCGACC TCGACGACGC AGACGTCGTC GCCGTTCGAC
GTGCCACCGC CCACGGAGGC GGGTGCGTTG CCTGAGTTCG TCGCGGCGGA GGGGCTCGGC
AGCGACTGCC AGTACCCGAA GTCCGCCGAG GCGGCCAGCA AGTCGAACAA CCCGCCGCGC
AGCGGCAAGG TGCCGACCGA ACCGGCGCTG GTCAGCGCCA GCATGGCCAC CGACCAGGGC
AACATCGGTC TGCAGCTGGA CAACGGCAAG TCGCCGTGCA CCGTCAACAG CTTCGCCAGC
CTGGCGCAGC AGGGATTCTT CAACGACACG CCGTGCCATC GGCTCACCAC CAGCGACTCG
CTCGGGGTGC TGCAGTGCGG CGACCCGACC GGCGAGGGCA CCGGAGGCCC TGGCTACGAG
TTCGCCAACG AGTACCCGAC CGACCAGTAC CAGCCCGACG ACCCGGCACT CGGAGCGCCC
GTCGTCTATC CGCGCGGCAC GTTGGCGATG GCCAACGCGG GACCCGGCAC CAACGGCAGC
CAGTTCTTCC TGGTCTACAA GGACTCGCAG TTGCCGCCGC AGTACACGGT GTTCGGGACG
ATCGACGAGA CCGGGTTGCA GACGCTGGAC AAGATCGCGG CCGCGGGGGT TGCCGGCGGG
GGTCCCGACG GCGCGCCGCA GCTGGCCACC ACGGTGAAGT CGATTCAGCT GGACTGA
 
Protein sequence
MAAQRQLAHS VPTGSTARRT PAVPTNEQRR ATAKRKLERQ LENRAERERK RRLYTIIGSA 
VAAVVVIAAV VATIVITNRD SGTQTASTAT STTQTSSPFD VPPPTEAGAL PEFVAAEGLG
SDCQYPKSAE AASKSNNPPR SGKVPTEPAL VSASMATDQG NIGLQLDNGK SPCTVNSFAS
LAQQGFFNDT PCHRLTTSDS LGVLQCGDPT GEGTGGPGYE FANEYPTDQY QPDDPALGAP
VVYPRGTLAM ANAGPGTNGS QFFLVYKDSQ LPPQYTVFGT IDETGLQTLD KIAAAGVAGG
GPDGAPQLAT TVKSIQLD