| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2587 |
|---|
| Symbol | |
|---|
| ID | 4643832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2729583 |
|---|
| End bp | 2731949 |
|---|
| Gene Length | 2367 bp |
|---|
| Protein Length | 788 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639806069 |
|---|
| Product | (p)ppGpp synthetase I, SpoT/RelA |
|---|
| Protein accession | YP_953401 |
|---|
| Protein GI | 120403572 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.613367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA AGGTGAGGAC GGAACCCGTC GCAGGCCAGG CCGTGCAGTC ACCGCCGCCG
CCGGTCGCCA CCCCGGAAAC CCAGCCGATG GAGCTCCCCA AGCCGCCGAC CAGCGCGTCG
CGCCGGGTGC GGGCCCGGCT GGCCCGCCGG ATGACCTCGC AGCGCAGCAC CATCAACCCG
GTGCTCGAGC CGCTGGTCGC GGTGCACCGC GAGATCTACC CCAAGGCCGA CCTGACGCTG
TTGCAGAAGG CGTACGAGGT CGCCGAGCAG CGCCACGCCG ACCAGCTGCG CAAGTCCGGG
GACCCCTACA TCACCCACCC GCTGGCGGTG GCGAACATCC TGGCCGAGCT CGGCATGGAC
ACCACCACGC TGATCGCCGC GCTGCTGCAC GACACCGTCG AGGACACCGG CTACACCCTT
GAGGCGCTGA CCCAGGAGTT CGGCACCGAG GTCGGTCACC TGGTCGACGG CGTCACCAAG
CTCGACAAGG TGGCGTTGGG CACCGCGGCC GAGGGCGAGA CCATCCGCAA GATGATCATC
GCGATGGCGC GGGACCCGCG GGTGCTGGTG ATCAAGGTCG CCGACCGGCT TCACAACATG
CGCACCATGC GCTTCCTGCC GCCGGAGAAG CAGGCGCGCA AGGCCCGCGA GACGCTGGAA
GTCATTGCGC CGCTTGCGCA TCGGCTCGGA ATGGCGACGG TCAAGTGGGA GCTGGAGGAC
CTGTCCTTCG CGATCCTGCA CCCGAAGAAG TACGAGGAGA TCGTGCGGCT GGTCGCCGAC
CGGGCGCCCT CGCGGGACAC CTACCTGGCC AAGGTGCGCG CCGAGATCAC CGCCACCCTC
AACGCGTCGA AGATCAACGC CACCGTCGAG GGCAGGCCCA AGCACTACTG GTCGATCTAT
CAGAAGATGA TCGTCAAGGG CCGCGACTTC GACGACATCC ACGACCTGGT CGGGGTGCGC
ATCCTGTGCG ACGAGGTCCG CGACTGCTAC GCCGCGGTCG GCGTGGTGCA CTCGCTGTGG
CAACCCATCG CCGGACGGTT CAAGGACTAC ATCGCCCAGC CGCGGTTCGG CGTCTACCAG
TCCCTGCACA CCACGGTCGT CGGTCCCGAG GGTAAGCCGC TGGAAGTGCA GATCCGCACG
ATCGACATGC ACAAGACCGC CGAGTACGGC ATTGCCGCGC ACTGGCGCTA CAAGGAAGCC
AAGGGCCGCA ACGGGGTACC GCCCAGCCAC GCTGCCACCG AGATCGACGA CATGGCATGG
ATGCGGCAGC TGCTCGACTG GCAGCGGGAG GCCGCCGACC CGGGCGAGTT CCTGGAGTCG
CTGCGCTACG ACCTTGCGGT GCAGGAGATC TTCGTGTTCA CCCCGAAGGG GGATGTGATC
ACGCTTCCCA CCGGCTCCAC GCCGGTGGAC TTCGCCTACG CGGTGCACAC CGAGGTGGGG
CACCGCTGTA TCGGGGCCCG CGTCAACGGC CGCCTTGTTG CCCTGGAGCG CAAGCTCGAA
AACGGGGAAG TGGTCGAGGT TTTCACATCC AAGGCGCCCA ACGCGGGTCC GTCGCGGGAC
TGGCAGACCT TCGTCGTGTC CCCGCGTGCC AAGGCCAAGA TCCGGCAGTG GTTCGCCAAG
GAGCGGCGCG AGGAGGCGCT GGACTCCGGC AAGGAGGCGA TCGCCCGCGA GGTGCGCCGT
GGTGGACTTC CGTTGCAGCG CTTGATGAAT GCAGAGACGA TGGCCGCGCT GGCCCGCGAA
CTGCGGTACG CCGACGTGTC CGCTCTCTAC ACCGCGGTCG GCGAGGGGCA CGTGTCCGCA
CGGCACGTCG TGCAGCGGTT GGTAGCCCAG CTCGGCGGTG ACGACGAAGC GGCCGACGAG
ATCGCCGAGC GCTCCACACC GGCGACCATG CCGGTGCGGC AGCGCACCAG CGACGACGTC
GGGGTCGCCG TGCCGGGCGC GCCGGGGGTG TTGTGCAAGC TCGCCAAATG CTGCACACCG
GTGCCGGGCG ACAACATCAT GGGCTTCGTC ACGCGCGGCG GCGGGGTCAG CGTGCACCGC
ACCGACTGCA CCAACGCCGC GTCGCTGCAA GATCAGTCAG AACGCATCAT CGAGGTGCAG
TGGGCACCGT CACCGTCGTC GGTGTTCCTG GTCGCGATCC AGGTCGAGGC GCTCGACCGG
CACCGGCTGC TGTCGGACGT GACCCGCGTG CTCGCCGACG AGAAGGTCAA CATCCTGTCG
GCGTCGGTGA CCACGTCCAA CGACCGGGTC GCGATCAGCC GGTTCACCTT CGAGATGGGC
GACCCCAAGC ACCTCGGCCA CGTCCTCAAC GTGGTGCGCA ACGTGGAGGG CGTCTACGAC
GTCTACCGCG TCACGTCCGC GGCCTGA
|
|---|
| Protein sequence | MADKVRTEPV AGQAVQSPPP PVATPETQPM ELPKPPTSAS RRVRARLARR MTSQRSTINP
VLEPLVAVHR EIYPKADLTL LQKAYEVAEQ RHADQLRKSG DPYITHPLAV ANILAELGMD
TTTLIAALLH DTVEDTGYTL EALTQEFGTE VGHLVDGVTK LDKVALGTAA EGETIRKMII
AMARDPRVLV IKVADRLHNM RTMRFLPPEK QARKARETLE VIAPLAHRLG MATVKWELED
LSFAILHPKK YEEIVRLVAD RAPSRDTYLA KVRAEITATL NASKINATVE GRPKHYWSIY
QKMIVKGRDF DDIHDLVGVR ILCDEVRDCY AAVGVVHSLW QPIAGRFKDY IAQPRFGVYQ
SLHTTVVGPE GKPLEVQIRT IDMHKTAEYG IAAHWRYKEA KGRNGVPPSH AATEIDDMAW
MRQLLDWQRE AADPGEFLES LRYDLAVQEI FVFTPKGDVI TLPTGSTPVD FAYAVHTEVG
HRCIGARVNG RLVALERKLE NGEVVEVFTS KAPNAGPSRD WQTFVVSPRA KAKIRQWFAK
ERREEALDSG KEAIAREVRR GGLPLQRLMN AETMAALARE LRYADVSALY TAVGEGHVSA
RHVVQRLVAQ LGGDDEAADE IAERSTPATM PVRQRTSDDV GVAVPGAPGV LCKLAKCCTP
VPGDNIMGFV TRGGGVSVHR TDCTNAASLQ DQSERIIEVQ WAPSPSSVFL VAIQVEALDR
HRLLSDVTRV LADEKVNILS ASVTTSNDRV AISRFTFEMG DPKHLGHVLN VVRNVEGVYD
VYRVTSAA
|
|---|
| |