Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2496 |
Symbol | |
ID | 4643907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 2646806 |
End bp | 2647327 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639805978 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_953314 |
Protein GI | 120403485 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.459575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.461415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCTCAC ATTCGTGCCG CCCCGGCCGT CTTCATGATG TGAAGGTGCG ACCGTTCGAA GAGGTGGTGG CCCACCACGG CGCCACGGTG CTGCGGGTGT GCCGGGCGGT GGTCGGCGCC GCGGACGCCG AGGACGCGTG GTCCGAGACG TTCCTGTCCG CCCTGCGCGG CTACCCCGAC CTCCCCGAAG ACGCCAACGT CGAAGCCTGG CTGGTGACCA TCGCCCACCG GCGCGCCCTC GACGTCGGGC GGGCGCGTGC CCGACGCGCG GTGCCCGTCG AGGCGGTGCC TGAGCGCGCC GACGCGCGCG CCGACCCGGC CGCCCGCGAT CCGGACCTGT GGACGGCGCT GCAGCGACTG CCCGCCAAAC AACGCCATGC CGTGGCCTAC CACCACATCG CCGGGCTGCC CTTCACCGAG ATCGCCGCCA TCCTGGGCAA CTCCCCCGAC GCCGCGCGCC GGGCCGCCGC CGACGGCATC AAGAACCTGC GCGCACACTA TCGTGAGGAC GAAAAGCCAT GA
|
Protein sequence | MISHSCRPGR LHDVKVRPFE EVVAHHGATV LRVCRAVVGA ADAEDAWSET FLSALRGYPD LPEDANVEAW LVTIAHRRAL DVGRARARRA VPVEAVPERA DARADPAARD PDLWTALQRL PAKQRHAVAY HHIAGLPFTE IAAILGNSPD AARRAAADGI KNLRAHYRED EKP
|
| |