Gene Mvan_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2496 
Symbol 
ID4643907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2646806 
End bp2647327 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content73% 
IMG OID639805978 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_953314 
Protein GI120403485 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.459575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.461415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCAC ATTCGTGCCG CCCCGGCCGT CTTCATGATG TGAAGGTGCG ACCGTTCGAA 
GAGGTGGTGG CCCACCACGG CGCCACGGTG CTGCGGGTGT GCCGGGCGGT GGTCGGCGCC
GCGGACGCCG AGGACGCGTG GTCCGAGACG TTCCTGTCCG CCCTGCGCGG CTACCCCGAC
CTCCCCGAAG ACGCCAACGT CGAAGCCTGG CTGGTGACCA TCGCCCACCG GCGCGCCCTC
GACGTCGGGC GGGCGCGTGC CCGACGCGCG GTGCCCGTCG AGGCGGTGCC TGAGCGCGCC
GACGCGCGCG CCGACCCGGC CGCCCGCGAT CCGGACCTGT GGACGGCGCT GCAGCGACTG
CCCGCCAAAC AACGCCATGC CGTGGCCTAC CACCACATCG CCGGGCTGCC CTTCACCGAG
ATCGCCGCCA TCCTGGGCAA CTCCCCCGAC GCCGCGCGCC GGGCCGCCGC CGACGGCATC
AAGAACCTGC GCGCACACTA TCGTGAGGAC GAAAAGCCAT GA
 
Protein sequence
MISHSCRPGR LHDVKVRPFE EVVAHHGATV LRVCRAVVGA ADAEDAWSET FLSALRGYPD 
LPEDANVEAW LVTIAHRRAL DVGRARARRA VPVEAVPERA DARADPAARD PDLWTALQRL
PAKQRHAVAY HHIAGLPFTE IAAILGNSPD AARRAAADGI KNLRAHYRED EKP