Gene Mvan_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2488 
Symbol 
ID4648128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2639962 
End bp2641227 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content64% 
IMG OID639805970 
Productputative integral membrane protein 
Protein accessionYP_953306 
Protein GI120403477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.59815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.388539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGATC TTGTTCTGAC CGCTTTCCGG CCCCGCACGT CCCCTCCCAC GACGGCGTCT 
GTGCTGCGGT CGATCCTGTG GCCGCTGGCG ATCATGGCGG TCATCCACCG CAGCTATGTG
CTGGTCTTCA ACCGTTACAT CACCGACGAT TTCGCGCCGG TGTACCGCGC GGTGATCAAC
TTCAAGTTCG GTTGGGACAT CTACAACGAG AACTTCGGCC ACGTCGACCC GCACTATCTC
TATCCGCCCG GCGGAACGCT GATCATCGCG CCGTTCGGCT ACCTGCCCGA GGTCGCGTCG
CGGAACTGGT TCATCTTCTT CAACACGGTC GCGATCGTCC TCGCGGGCTA TTTCCTGCTG
CGGCTGTTCA ACTTCACGCT CGCCTCCGTG GCGGCACCCG CGCTGCTGCT GGCGATGTTC
TGCACCGAGA GCGTCACCAA CACGCTGGTG TTCGGCAACA TCAACGGCGT CATCCTGCTG
TTGGAGGTGC TGTTCTTCCG TTGGCTGCTG GACGGCAACC GCAGCCACGA ATGGTGGGCC
GGGGTGAGCA TCGGGTTGAC GCTGGTGGTG AAACCGCTGC TGGCCCCACT GCTGCTGCTG
CCGTTGCTCA ACCGGCAGTG GCGCGCGCTG GTCACGGCGT TCGCGGTGCC CGTCGCGTTC
AACCTTGCGG CGTGGCCGCT GATCAGCGAC CCGATGAACT TCGTCACCCG CACCGTGCCC
TACATCTTCT CCACCCGCGA CTACTTCAAC AGCTCGATCC TGGGCAACGG GCTCTACTAC
GGACTGCCGA TGTGGCTGAT CATGTCGCTG CGGATCGCGT TCGTGGTGCT GGGCGCGGCG
GCGCTGTGGC TGCTGTACCG CTACTACCGC ACCCGCGATC CGTTCTTCTG GATGCTCACG
TCTTCCGGCG TGGTGCTGGT GACCTCGTGG CTGGTGCTGT CGCTGGGCCA GGGCTACTAC
TCGATCGTGT TGTTCCCGTT CCTGATGACG GTCGTGCTGC CGAACTCGGT GATCCGTAAC
TGGGTGGCCT GGCTGGCCGC CTACGGATTC CTGACCATGG ATCGCTGGTT GCTGTGGCAA
CTGCCGACCA CCGGCCGCGC CCTCGAATAC CTGAAGATCA CCTTCGGCTG GTCACTCATG
TCGGTGGTGG TCTTCTCGGT GCTGCTGTTC CGCTACCTCG ACGCCAAGGA CGACGGTCGC
CTCGACGAGG GCATCGATCC GCCGTGGATG AAACAGCTCA CCCCTGCGGA CAAGGCCGCC
GAGTAG
 
Protein sequence
MRDLVLTAFR PRTSPPTTAS VLRSILWPLA IMAVIHRSYV LVFNRYITDD FAPVYRAVIN 
FKFGWDIYNE NFGHVDPHYL YPPGGTLIIA PFGYLPEVAS RNWFIFFNTV AIVLAGYFLL
RLFNFTLASV AAPALLLAMF CTESVTNTLV FGNINGVILL LEVLFFRWLL DGNRSHEWWA
GVSIGLTLVV KPLLAPLLLL PLLNRQWRAL VTAFAVPVAF NLAAWPLISD PMNFVTRTVP
YIFSTRDYFN SSILGNGLYY GLPMWLIMSL RIAFVVLGAA ALWLLYRYYR TRDPFFWMLT
SSGVVLVTSW LVLSLGQGYY SIVLFPFLMT VVLPNSVIRN WVAWLAAYGF LTMDRWLLWQ
LPTTGRALEY LKITFGWSLM SVVVFSVLLF RYLDAKDDGR LDEGIDPPWM KQLTPADKAA
E