Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2477 |
Symbol | |
ID | 4648117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2629227 |
End bp | 2631140 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639805960 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_953296 |
Protein GI | 120403467 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.705455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAC AGATCCGCGG TCCCGCAGAT CTACAGCACC TGTCGCAGGC GCAGCTGGAG GACCTGGCCC ACGAAATCCG TGACTTCCTG ATCCACAAAG TCGCGGCCAC AGGTGGGCAC CTGGGACCCA ACCTCGGCGT GGTCGAACTG ACGTTGGCGC TGCACCGGGT GTTCGACTCG CCGCACGACC CGATCCTGTT CGACACCGGT CATCAGGCCT ACGTGCACAA GATGCTCACG GGCCGCTGCC GGGACTTCGA TTCGCTGCGC AAGAAGGACG GCCTGTCCGG TTACCCGTCG AGCGCCGAGA GCGAGCACGA CTGGATCGAG TCCAGCCACG CCAGCTCGGC GCTGTCCTAC GCCGACGGGC TGGCGAAGGC CTTCGAGCTG TCCGGCCACC GCAACCGGCA CGTCGTGGCG GTGGTGGGTG ACGGCGCGTT GACCGGCGGG ATGTGCTGGG AGGCGTTGAA CAACATCGCG GCGTCGCGCC GGCCTGTGGT GATCGTCGTC AACGACAACG GCCGCAGCTA TGCGCCGACG ATCGGCGGTT TCGCCGAGCA TCTCGCGGGT CTTCGGTTGC AGCCGGGGTA CGAGCGGGTC CTCGAGGAGG GCCGCAAGGC AGTCCGCGGT GTCCCGATGA TCGGCGAGTT CTGCTACCAG TGCATGCACA GCATCAAGGT GGGCATCAAG GACGCGTTGT CGCCGCAGGT GATGTTCACC GACCTGGGGC TGAAGTACGT GGGTCCGATC GACGGCCACG ACGAGCACGC GGTGGAGAGC GCGCTGCGCC ACGCGCGGGC CTTCAACGCC CCGGTGGTGG TCCACGTCGT CACGCGCAAG GGCATGGGGT ATGCGCCCGC CGAGAACGAC GCCGACGACC AGATGCATGC CTGCGGCGTC ATCGATCCCG AGACCGGTCT GGCCACCTCG GTGCCGGGCC CCGGATGGAC CTCGACGTTC TCCGAGGCGC TGATCCGGCT GGCCGGCAAG CGTCGCGACA TCGTCGCGAT CACCGCCGCG ATGCCCGGAC CGACCGGCCT GAGCGCGTTC CGGGACCGCT TCCCGGACCG GTTCTTCGAC GTCGGCATCG CCGAGCAGCA CGCGATGACG TCGGCGGCCG GCCTGGCGAT GGGCGGGATG CACCCGGTAG TGGCGATCTA TTCGACGTTC CTCAACCGTG CGTTCGACCA GATGCTCATG GACGTTGCGC TGCACAAGCT TCCCGTGACG GTGGTGCTGG ACCGGTCGGG TGTCACCGGA CCCGACGGCG CCAGCCACAA CGGCATGTGG GACCTGTCGA TTCTGGGCAT CGTGCCCGGG ATGCGGGTCG CCGCACCGCG TGACGGTGCC CGGCTGCGCG AAGAGCTCGG CGAGGCGCTC GATGTCTCCG ACGGCCCTAC CGCCATCCGC TTCCCGAAAG GTGATGTCGG CGAGGACATC CCGGCGATCG AGCGGCGCGG CGACGTCGAT GTGCTCGCCG TCCCCGCCGA CGGCATGTCC GAGGACGTGC TGCTGGTCGC CGTCGGCCCG TTCGCCGCCA TGGCGCTGGC GGTCGCCGAC CGGTTGCGCA ACCAGGGGAT CGGCGTGACG GTCGTCGACC CGCGCTGGGT GCTGCCGGTT CCGGAGGAGA TCGCCACGCT GGCCACCAGG CACAAGCTCG TCGTCACCCT CGAAGACAAC GGCGGCCACG GCGGTGTCGG TTCGGCGGTG TCGGGCGCGT TGCGGCACAA GGAGATCGAC GTGCCATGCC GCGACGCCGC GTTGCCTCAG GAGTTCTTCG CCCACGCCTC GCGCGGCGAG GTGTTGGAGT CTGTCGGCCT GACCGAACGC AACATCGCCC GCCAGATCAC CGGCTGGGTG GCCGCGCTCG GGGCCTCGAC GGGTGACCGT GAGGTCAGCG AGCACGTCGA CTGA
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Protein sequence | MLEQIRGPAD LQHLSQAQLE DLAHEIRDFL IHKVAATGGH LGPNLGVVEL TLALHRVFDS PHDPILFDTG HQAYVHKMLT GRCRDFDSLR KKDGLSGYPS SAESEHDWIE SSHASSALSY ADGLAKAFEL SGHRNRHVVA VVGDGALTGG MCWEALNNIA ASRRPVVIVV NDNGRSYAPT IGGFAEHLAG LRLQPGYERV LEEGRKAVRG VPMIGEFCYQ CMHSIKVGIK DALSPQVMFT DLGLKYVGPI DGHDEHAVES ALRHARAFNA PVVVHVVTRK GMGYAPAEND ADDQMHACGV IDPETGLATS VPGPGWTSTF SEALIRLAGK RRDIVAITAA MPGPTGLSAF RDRFPDRFFD VGIAEQHAMT SAAGLAMGGM HPVVAIYSTF LNRAFDQMLM DVALHKLPVT VVLDRSGVTG PDGASHNGMW DLSILGIVPG MRVAAPRDGA RLREELGEAL DVSDGPTAIR FPKGDVGEDI PAIERRGDVD VLAVPADGMS EDVLLVAVGP FAAMALAVAD RLRNQGIGVT VVDPRWVLPV PEEIATLATR HKLVVTLEDN GGHGGVGSAV SGALRHKEID VPCRDAALPQ EFFAHASRGE VLESVGLTER NIARQITGWV AALGASTGDR EVSEHVD
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