| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2461 |
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| Symbol | |
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| ID | 4645509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 2614695 |
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| End bp | 2616131 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639805944 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_953280 |
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| Protein GI | 120403451 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAGCGA CCAAAGCAAG CCCGGCAACC GAAGAGCCGG TGAAGCGCAC CGCAGCCAAG
GCCCCCGCCA AGAAGGCGCC CGCGAAGAAG GCCGCCAAGA GCGCGCCCGC GAAGGCCACC
AAGCCGCGCG CCGCCAAATC CGCTGATGCG CCGGCCACCC GCGGCCGCGC CAAGAAGGCC
ACCGCGCCCG GGGCCGTCGA CGACGATCTC GCCGGTTCCG ACGTCGAGAC GGGCGACGAT
CTCGTCGAGG CCGAGCCCGG CGACGACCTG GAGGTCGAGG ACACCGACCT CGTGCTCGAC
GAGGAACTCG AAGTCGACGA CGACACCGCG GTAGACGGTG ACTCCGACGA CGAGGACGCC
GACGAGGGCG CACCCAAGGC GGCCAAGCCC GCCAAGGACG GCGACGACGA CGGTGTCGCC
GAGCCCTCCG AGAAGGACAA GGCCTCCGGT GACTTCGTCT GGGACGAGGA AGAGTCCGAG
GCTCTGCGGC AGGCGCGCAA GGACGCCGAG CTCACCGCTT CGGCGGACTC GGTCCGCGCC
TACCTCAAGC AGATCGGCAA GGTCGCGCTG CTCAACGCCG AGGAGGAGGT CGAGCTCGCC
AAACGCATCG AGGCAGGCCT GTACGCCACC CAGTTGATGG CCGAACTCGC CGACAAGGGC
GAGAAGCTGC CCGCCGCGCA GCGACGCGAC ATGATGTGGA TCTGCCGCGA CGGTGACCGC
GCCAAAAACC ATCTGCTGGA GGCGAACCTG CGTCTGGTGG TGTCGCTGGC CAAGCGGTAC
ACGGGCCGCG GCATGGCGTT CCTGGACCTC ATCCAGGAGG GCAACCTCGG TCTGATCCGC
GCGGTGGAGA AGTTCGACTA CACCAAGGGC TACAAGTTCT CCACGTACGC GACGTGGTGG
ATCCGGCAGG CCATCACCCG GGCGATGGCC GACCAGGCCC GCACCATCCG TATCCCGGTG
CACATGGTCG AGGTCATCAA CAAGCTGGGC CGTATCCAGC GCGAGCTGCT GCAGGACCTG
GGCCGTGAAC CCACGCCCGA AGAGCTGGCC AAGGAAATGG ACATCACGCC GGAGAAGGTG
CTGGAGATCC AGCAGTACGC GCGTGAGCCG ATCTCGCTGG ACCAGACCAT CGGTGACGAG
GGCGACAGCC AGCTGGGCGA TTTCATCGAG GACTCCGAGG CCGTGGTGGC CGTCGACGCG
GTGAGCTTCA CCCTGCTGCA GGATCAGCTG CAGTCGGTGT TGGAGACGCT GTCCGAGCGT
GAGGCCGGTG TGGTGCGGCT GCGGTTCGGT CTCACCGACG GCCAGCCCCG CACGCTCGAC
GAGATCGGTC AGGTGTACGG CGTCACCCGC GAGCGCATCC GGCAGATCGA GTCGAAGACG
ATGTCGAAGT TGCGCCATCC CAGCCGTTCT CAGGTGCTTC GCGACTATCT CGACTGA
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| Protein sequence | MAATKASPAT EEPVKRTAAK APAKKAPAKK AAKSAPAKAT KPRAAKSADA PATRGRAKKA
TAPGAVDDDL AGSDVETGDD LVEAEPGDDL EVEDTDLVLD EELEVDDDTA VDGDSDDEDA
DEGAPKAAKP AKDGDDDGVA EPSEKDKASG DFVWDEEESE ALRQARKDAE LTASADSVRA
YLKQIGKVAL LNAEEEVELA KRIEAGLYAT QLMAELADKG EKLPAAQRRD MMWICRDGDR
AKNHLLEANL RLVVSLAKRY TGRGMAFLDL IQEGNLGLIR AVEKFDYTKG YKFSTYATWW
IRQAITRAMA DQARTIRIPV HMVEVINKLG RIQRELLQDL GREPTPEELA KEMDITPEKV
LEIQQYAREP ISLDQTIGDE GDSQLGDFIE DSEAVVAVDA VSFTLLQDQL QSVLETLSER
EAGVVRLRFG LTDGQPRTLD EIGQVYGVTR ERIRQIESKT MSKLRHPSRS QVLRDYLD
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