Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2461 |
Symbol | |
ID | 4645509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 2614695 |
End bp | 2616131 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639805944 |
Product | RNA polymerase sigma factor |
Protein accession | YP_953280 |
Protein GI | 120403451 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGCGA CCAAAGCAAG CCCGGCAACC GAAGAGCCGG TGAAGCGCAC CGCAGCCAAG GCCCCCGCCA AGAAGGCGCC CGCGAAGAAG GCCGCCAAGA GCGCGCCCGC GAAGGCCACC AAGCCGCGCG CCGCCAAATC CGCTGATGCG CCGGCCACCC GCGGCCGCGC CAAGAAGGCC ACCGCGCCCG GGGCCGTCGA CGACGATCTC GCCGGTTCCG ACGTCGAGAC GGGCGACGAT CTCGTCGAGG CCGAGCCCGG CGACGACCTG GAGGTCGAGG ACACCGACCT CGTGCTCGAC GAGGAACTCG AAGTCGACGA CGACACCGCG GTAGACGGTG ACTCCGACGA CGAGGACGCC GACGAGGGCG CACCCAAGGC GGCCAAGCCC GCCAAGGACG GCGACGACGA CGGTGTCGCC GAGCCCTCCG AGAAGGACAA GGCCTCCGGT GACTTCGTCT GGGACGAGGA AGAGTCCGAG GCTCTGCGGC AGGCGCGCAA GGACGCCGAG CTCACCGCTT CGGCGGACTC GGTCCGCGCC TACCTCAAGC AGATCGGCAA GGTCGCGCTG CTCAACGCCG AGGAGGAGGT CGAGCTCGCC AAACGCATCG AGGCAGGCCT GTACGCCACC CAGTTGATGG CCGAACTCGC CGACAAGGGC GAGAAGCTGC CCGCCGCGCA GCGACGCGAC ATGATGTGGA TCTGCCGCGA CGGTGACCGC GCCAAAAACC ATCTGCTGGA GGCGAACCTG CGTCTGGTGG TGTCGCTGGC CAAGCGGTAC ACGGGCCGCG GCATGGCGTT CCTGGACCTC ATCCAGGAGG GCAACCTCGG TCTGATCCGC GCGGTGGAGA AGTTCGACTA CACCAAGGGC TACAAGTTCT CCACGTACGC GACGTGGTGG ATCCGGCAGG CCATCACCCG GGCGATGGCC GACCAGGCCC GCACCATCCG TATCCCGGTG CACATGGTCG AGGTCATCAA CAAGCTGGGC CGTATCCAGC GCGAGCTGCT GCAGGACCTG GGCCGTGAAC CCACGCCCGA AGAGCTGGCC AAGGAAATGG ACATCACGCC GGAGAAGGTG CTGGAGATCC AGCAGTACGC GCGTGAGCCG ATCTCGCTGG ACCAGACCAT CGGTGACGAG GGCGACAGCC AGCTGGGCGA TTTCATCGAG GACTCCGAGG CCGTGGTGGC CGTCGACGCG GTGAGCTTCA CCCTGCTGCA GGATCAGCTG CAGTCGGTGT TGGAGACGCT GTCCGAGCGT GAGGCCGGTG TGGTGCGGCT GCGGTTCGGT CTCACCGACG GCCAGCCCCG CACGCTCGAC GAGATCGGTC AGGTGTACGG CGTCACCCGC GAGCGCATCC GGCAGATCGA GTCGAAGACG ATGTCGAAGT TGCGCCATCC CAGCCGTTCT CAGGTGCTTC GCGACTATCT CGACTGA
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Protein sequence | MAATKASPAT EEPVKRTAAK APAKKAPAKK AAKSAPAKAT KPRAAKSADA PATRGRAKKA TAPGAVDDDL AGSDVETGDD LVEAEPGDDL EVEDTDLVLD EELEVDDDTA VDGDSDDEDA DEGAPKAAKP AKDGDDDGVA EPSEKDKASG DFVWDEEESE ALRQARKDAE LTASADSVRA YLKQIGKVAL LNAEEEVELA KRIEAGLYAT QLMAELADKG EKLPAAQRRD MMWICRDGDR AKNHLLEANL RLVVSLAKRY TGRGMAFLDL IQEGNLGLIR AVEKFDYTKG YKFSTYATWW IRQAITRAMA DQARTIRIPV HMVEVINKLG RIQRELLQDL GREPTPEELA KEMDITPEKV LEIQQYAREP ISLDQTIGDE GDSQLGDFIE DSEAVVAVDA VSFTLLQDQL QSVLETLSER EAGVVRLRFG LTDGQPRTLD EIGQVYGVTR ERIRQIESKT MSKLRHPSRS QVLRDYLD
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