Gene Mvan_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2454 
Symbol 
ID4645502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2608786 
End bp2609820 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID639805937 
Productribonuclease BN 
Protein accessionYP_953273 
Protein GI120403444 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.458983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACC AGTCAGAGCG GCCGGACGTG CGGCCCACGC AGCGGGCCAG ACCGTCTCGC 
CACCACATTC GGCACATCAC GATCCGAGCC CTGAGCAAGA GTTGGGACGA CTCGATCTTC
TCGGAGTCGG CCCAGGCCGC TTTTTGGTGC GCCCTGTCGC TGCCGCCGCT GCTTCTCGGA
ATGCTCGGCA GCCTCGCCTA CGTGGCACCG CTGTTCGGCC CCGACACCTT GGTGACGATC
CAGAGCCAGC TCGTCAGCCT GGCGGGACGG TTCTTCTCCC CCAACGTCGT CAGCGAGATC
ATCGAGCCGA CGGTGCGTGA CATCGTGCGC GGGGCGCGCG GTGAGGTGGT GTCGCTGGGC
TTCGTGATCT CGCTGTGGGC GGGGTCGTCG GCCATTTCGG CATTCGTCGA CTCCATCACC
GAGGCCCACG ATCAGACACC GCTGCGCCAC CCGGTGCGGC AACGGTTCTA CGCGCTGGGG
CTCTACGTCG TGATGCTCGT CGGTGCGATC GTCGCGGCGC CGTTTTTGGC ACTGGGCCCG
CGCAAGGTGG CCGAGTTCAT CCCCGACAGC TGGGACAGCG CACTTCAATT CGCCTACTAC
CCGGTGCTGT TCGTCGCGCT GGTGGTGTCG GTGAACCTGC TGTACCGGGT GTCGCTGCCC
AAACCGCTGC CGTCGCACCG CCTCCTGCTG GGTTCCGTGC TGGCCGCCGC GGTGTTCCTG
ATCGCGACAT GGGGGCTGAG GGTCTACCTG ACGTGGATCA CCAGCACGGG TTACACCTAC
GGCGCGTTGG CGACGCCGAT CGCCTTCCTG TTGTTCGCGT TCTTCCTCGG GTTCGCGATC
ATGATCGGCG CCGAACTCAA CGCGGCCATC GAAGAGGAGT TTCCGGCGCC GGACACGCAC
GCGAAACGCT TCCGCTGGTG GCTGGAGGCC AAGGCCGAAT CACTCAACGG CACCACCTCC
CCGACCGCGG CGCCCGGTGA ACCGCGCGCA GCCGCCGGCG GCCCGGTCGC CACCAGCGAC
GCGGCTACTT CTTGA
 
Protein sequence
MDDQSERPDV RPTQRARPSR HHIRHITIRA LSKSWDDSIF SESAQAAFWC ALSLPPLLLG 
MLGSLAYVAP LFGPDTLVTI QSQLVSLAGR FFSPNVVSEI IEPTVRDIVR GARGEVVSLG
FVISLWAGSS AISAFVDSIT EAHDQTPLRH PVRQRFYALG LYVVMLVGAI VAAPFLALGP
RKVAEFIPDS WDSALQFAYY PVLFVALVVS VNLLYRVSLP KPLPSHRLLL GSVLAAAVFL
IATWGLRVYL TWITSTGYTY GALATPIAFL LFAFFLGFAI MIGAELNAAI EEEFPAPDTH
AKRFRWWLEA KAESLNGTTS PTAAPGEPRA AAGGPVATSD AATS