Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2440 |
Symbol | |
ID | 4647684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2595563 |
End bp | 2597623 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639805923 |
Product | LGFP repeat-containing protein |
Protein accession | YP_953259 |
Protein GI | 120403430 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5479] Uncharacterized protein potentially involved in peptidoglycan biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.199605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0690104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGC AGCCGATGCT GCGCCGACGT CTGGTGGGTC GTTTGACGAT CGGGCTGCTG GGGGTCGCTA CGGCGCTCCT GCTCGCCCCC CACGCCACGG CGCAGCCCGA AGTGGAAGCC AACGACGCCA TCACGGCGGC ATGGCAGTCC AGCGGTGGCG ACACCGGTCC GCTGGGTCCC AGATCGGGCG ACGTGTACCC GGTGGGCTCT GGATTCGCCC AGAACTTCGC GTCGGGAAGA ATGTTCTTCA CCCCGGCCAC CGGCGCCCAC TTCATGCAGG GCGCGATTCT GGAGAAGTAC GACTCACTCG GCGGTCCCGC CGACAGCGAC CTCGGCTTTC CGACCATCGA CGAGGGTCCC GGGCGCGCGC CGGAGAGCCG TAACAGCACA TTCAGCGCTG CCGACAATCC GGTCATCTTC TGGACTCCGG CGACAGGCGC GAGGGTGGTC CGCGGTCCGA TCAACGCGGC CTGGGACAAG CTGGGTGGCT CCTCCGGGGT GCTCGGGGTG CCCGCCGAGG ACGAGACCTA CGACGGGTCC GTCGTCACCC AGAAGTTCAC CGGCGGCGAG CTGTCTTACG ACTCGGGTGC CAAGACGTTC ACCACGGTGC CGCCCGAGCT GGCGGGTCAG CTCACCGACC TGTCGATCCC TGACGACCCG ATCGCGGCGA TCAACGCCGC CCGCCGGGCT GCCGGCGGTG CCAGGGGGCC GCTCGGCGCG GCCGAAGGAG ACCCGTACGA GATCGGCTCC GACGGAATGG GCCAGGACTT CGTCAACGGC GCGATCTTCT ACAGCCCGGA GACGGGCGCC AATGTGGTCA CCGGTCAGGT GCTGGCCAAG TACCAGAGCG TCGGCGGTCC GGAAGGTGAT CTCGGGTTCC CGATCACCAG CGAGGCGGAC GGTGGACTGG CACCGGCGAG CCGTATCAGC TCCTTCGCCG CCGAAGACAA ACCGGTCATC TTCTGGACGC CCGACCACGG CGCGGTGATC GTGCGCGGCG CGATGAACGC GGCGTGGCAG AAGCTGGGTG GTGCGACCGG CGAGCTGGGC GCTCCGGTCG CCGACCAGAC CCAGAACGGT GATGTGATCA CCCAGCGCTT CAACGGCGGC GCCCTGTCCT GGGACACGGC GACGAAGAAG TTCAGCACCG AACCGGCCGG CCTCGCCCCG CAACTGGCGG GTCTGGAGGT CCCGGGCGCC GAGCCGCCGC AGGCGCCGCC GCAGTCGCAG TCGCAGGCAT CGGAGAACAG TGAGAGCTCC GGGCTGAAGT GGACCTGGTG GTGGCTGCTG GCGATCGTGC CGGTGCTGCT CCTGGCGGGC TTGGCGGCAT TCGCCGTGCT GCGCACGCGT GGGCGCCGCG GTGGCGGGGA TGAACTGTTC GGCGTGCCGG GGGAGACGGG GCACGACTAC GCGCCCGCAC TCGCAGGCGA AGGCGGCGGG GGTGTCCGGG ACGACGGTCC CGAGGATGCG CTGTTCGGCG ACCGCTACGC CCGTGAGGGG ATCGGGTCGC TGGCGTCGGC CACCCCGGTA CCGTCCTCGT CGACCGAGGA CTTCCACCCC GATCCGTCGA CTTTCTGGGG CGTGCCTGCC GGCGGTGGCG ACACCGGACC GGAGCTCGGT GAGCGCGAAC AACAGGTTGG CGAACAGGAG AACCCCGACA CCGTCGACAC CGCTCCGACG CGGGTGCTGA CGCCCGAGGA GCCGACGGTC GACGACGGTG AGGTCGAGGA TGTCACTCAG GCCACCGAGG CGCTGGACAT CGACCGTGAG CCGCTCCTTC CGCCGGACAT CGAATCCGTC GTGGCGCCCG CCCCGGATTC GATGACCGAC ACCGGGCGGC ACGCGCGGAT CGACATCGAC GAGCCGATGC CGCTGGGAAC CGCACTGCAC ATGCCGTTCG ACGACCCCGA CGAAGTCCCT GAGGGATATC CGGTCAAGGC CGACACCAAG ACGGGCCTCT ACTGGACTCC CGAGAGCGAC GACTACCACG AGGCGCCCGT CGAGATCTGG TTCGCCACTG AAGAAATTGC GCGTACGAAC GGTTTCGTCC GCGGCGAATA G
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Protein sequence | MSRQPMLRRR LVGRLTIGLL GVATALLLAP HATAQPEVEA NDAITAAWQS SGGDTGPLGP RSGDVYPVGS GFAQNFASGR MFFTPATGAH FMQGAILEKY DSLGGPADSD LGFPTIDEGP GRAPESRNST FSAADNPVIF WTPATGARVV RGPINAAWDK LGGSSGVLGV PAEDETYDGS VVTQKFTGGE LSYDSGAKTF TTVPPELAGQ LTDLSIPDDP IAAINAARRA AGGARGPLGA AEGDPYEIGS DGMGQDFVNG AIFYSPETGA NVVTGQVLAK YQSVGGPEGD LGFPITSEAD GGLAPASRIS SFAAEDKPVI FWTPDHGAVI VRGAMNAAWQ KLGGATGELG APVADQTQNG DVITQRFNGG ALSWDTATKK FSTEPAGLAP QLAGLEVPGA EPPQAPPQSQ SQASENSESS GLKWTWWWLL AIVPVLLLAG LAAFAVLRTR GRRGGGDELF GVPGETGHDY APALAGEGGG GVRDDGPEDA LFGDRYAREG IGSLASATPV PSSSTEDFHP DPSTFWGVPA GGGDTGPELG EREQQVGEQE NPDTVDTAPT RVLTPEEPTV DDGEVEDVTQ ATEALDIDRE PLLPPDIESV VAPAPDSMTD TGRHARIDID EPMPLGTALH MPFDDPDEVP EGYPVKADTK TGLYWTPESD DYHEAPVEIW FATEEIARTN GFVRGE
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