Gene Mvan_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2406 
Symbol 
ID4644828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2560722 
End bp2561030 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content64% 
IMG OID639805890 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_953226 
Protein GI120403397 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.232176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTTG CAGTACCGGG GAAGATCGTC AGCATCGACG AGCGGGACGG CACACTGATG 
TCGATCGTCG ACTTCGGCGG CGTCGAAAAA GACGTGTGTC TGCAGTACAT CCCCGACGCG
GAGGTCGGCC AGTACGTGGT CGTCCACGTC GGTTTCGCGA TCCAGCGGCT CGACGAGGAG
TCGGCGATCC GCACACTGGC CGAGTTCGAG CATCTCGGGG TCCTCAAGGA GGAGTTCGCC
GACGGCTTCG AGCTGGCCGC CCGGCAGGCC GGTCTGGCCA ATCCCAACAC CAACGGCGTT
CCGAGGTGA
 
Protein sequence
MCLAVPGKIV SIDERDGTLM SIVDFGGVEK DVCLQYIPDA EVGQYVVVHV GFAIQRLDEE 
SAIRTLAEFE HLGVLKEEFA DGFELAARQA GLANPNTNGV PR