Gene Mvan_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2400 
Symbol 
ID4644822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2555817 
End bp2556371 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content67% 
IMG OID639805884 
Productlimonene-1,2-epoxide hydrolase 
Protein accessionYP_953220 
Protein GI120403391 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4308] Limonene-1,2-epoxide hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0113747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ATGCCCAGGC CACACTGCGG CCGACCGCCA CCACCGACGC CCCCGACACG 
GTTCGCAAGT TCCTTTTCGC GCTGGCGGAG CAGGATTTCG ACACTTTCGA GTCGCTGGCG
GCGCCCGATC TGGTCTGGCA GAACGTCGGC CTGCCGTCCA TCCGGGGGCG CAGCAGGATC
ATGAAGATGT TGCGCCGCGG CGAAGGCAAG TTCGGGTTCC TGGTGAAGTT CCACCGCATC
GCCGCCAGCG ATGAGCGCTT GCGCGAAGAG CGGACCGGCA CCGATGAGCG CTTGCGCGAA
GAGCGGACCG GCACCGATGG GCGCTTGCGC GAAGAGCGGA CCGGCGCAGG CGCCACAGTG
CTCACCGAGC GCACCGATGC GCTGGTCTTC GGGAAGCTGC GGCTGCAGTT CTGGGTGTGC
GGCACGTTCG AGCTGAACGA CGCCGGCCAG GTCACGCTGT GGCGCGACTA CTTCGACTAC
GCCGACTTCC TGATCAAGGC ACCGCTGCGG GCGCTCGCCG GGCTGGTGGT GCCGTCACTT
CGTCCGACCT TCTGA
 
Protein sequence
MTDDAQATLR PTATTDAPDT VRKFLFALAE QDFDTFESLA APDLVWQNVG LPSIRGRSRI 
MKMLRRGEGK FGFLVKFHRI AASDERLREE RTGTDERLRE ERTGTDGRLR EERTGAGATV
LTERTDALVF GKLRLQFWVC GTFELNDAGQ VTLWRDYFDY ADFLIKAPLR ALAGLVVPSL
RPTF