Gene Mvan_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2396 
Symbol 
ID4644818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2553110 
End bp2553598 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content74% 
IMG OID639805880 
ProductCinA domain-containing protein 
Protein accessionYP_953216 
Protein GI120403387 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00298192 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGACGATC CGCTGGTCAA TGACGACGCG CGTGCCCTGA TCGCCGATCT GACCGTGCGC 
AGGCAGACGG TGGCGACGGC CGAATCGTTG ACCGCCGGGC TGTTGGCCGC CACCCTGGCC
GGCGTGCCGG GCGCCAGCAC GGTGCTGCGG GGCGGCCTGG TCACCTACAC CGTGGAGACC
AAGGCCGAAC TGGCCGGTGT GGCCCCCGAG CTACTCGCCG AAGTCGGTCC CGTCGCCGAA
CCCACCGCTC GTGCGCTGGC CGTCGGCGCG ATGCAGCGCT GCGGGGCGAC CTGGGGTGTC
GGCCTCACCG GGGTGGCGGG TCCGGAACCT CACGGAGGGC ACCGGGTCGG CACCGTGTTC
CTCGGCCTGG CCGGGCCGGT GGACACCGAC GTGGTGCGGT TACAGCTCGC GGGCGGACGC
TGGGACATCC GGCTGGCCGC CGTGCACGCC GCGGTGCACC GGCTGCGGCT GCTGGTCGAG
CGGCAGTGA
 
Protein sequence
MDDPLVNDDA RALIADLTVR RQTVATAESL TAGLLAATLA GVPGASTVLR GGLVTYTVET 
KAELAGVAPE LLAEVGPVAE PTARALAVGA MQRCGATWGV GLTGVAGPEP HGGHRVGTVF
LGLAGPVDTD VVRLQLAGGR WDIRLAAVHA AVHRLRLLVE RQ