| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2361 |
|---|
| Symbol | |
|---|
| ID | 4648031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2519215 |
|---|
| End bp | 2520318 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639805845 |
|---|
| Product | hydrogenase expression/formation protein HypD |
|---|
| Protein accession | YP_953181 |
|---|
| Protein GI | 120403352 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0409] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.255752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.11293 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATATC TCGACGAGTT CCGCGACCCG GCGGCGGCAG CGGTGTTGGT CGACGCGATC
CGCCGTCGGG CCACCAAGCC CTGGACCGTC ATGGAAGTCT GTGGTGGACA GACACATTCG
ATCATCCGCA ACGGAATCGA CCAGTTGCTG GCCGGAGCAG TCGAGTTCAT CCACGGCCCG
GGCTGCCCGG TGTGCGTCAC GCCGCTGGAG ATGATCGACC GGGCGTTGGC CATCGCGGCA
CGCCCCGACG TCATCTTCTG CTCGTTCGGC GACATGCTGC GGGTTCCCGG CAGCAGCCAG
GACCTGTTCG GTGTGCGCGC CCGAGGCGGG GACGTCCGCA TCGTCTACTC CCCACTGGAT
GCCACCCGGA TCGCCGCGGA CAACCCGGAC AAGCAGGTGG TGTTCTTCGG TGTCGGATTC
GAGACCACCG CACCGGCCAA CGCGATGGCG GTGCTGCACG CTCAGCGACT CGGGCTGACC
AACTTCTCGA TGCTGGTCTC GCATGTGCTG GTGCCCCCGG CGATGACCGC GATCCTGTCG
TCTCCCACCA ACCGGGTGCA GGGCTTCCTC GCCGCCGGCC ATGTCTGTTC GGTCATGGGC
ACTTCCGAAT ACGAACCGCT TGTCACCGAA TTCGGGGTGC CGATCGTCGT CACCGGTTTC
GAACCGCTGG ACCTGCTCGA GGGCGTGCGG CAGGTGGTGG AGCTGCTGGA AGAGGGCACA
CCCGCGCTGC GCAACGCCTA CCCCCGCGCG GTCAGCGCCG AGGGCAACCT GGTGGCCCAG
AAGACCCTCG CCGAGGTGTT CGCGGTCACC GACCGGCAGT GGCGCGGTAT CGGCATGATT
CCACGGTCCG GATGGACCCT GTCGCCGCGC TACGCCGAGT TCGACGCCGA GCGCCGGTTC
GGTGTCGGCC ATCTCCAGGT GGCGGAATCC TCGGACTGCC GCAGTGGGGA GGTACTGCAG
GGGTTGCTCA AACCCAACGA GTGTCCGGCA TTCGGTCGCA CCTGTACGCC GCGCACACCG
CTGGGCGCGA CCATGGTGTC CAGCGAGGGC GCGTGTGCCG CGTACTACCA GTTCCGCCGG
CTGGAGACGG CCGCGCATGC CTGA
|
|---|
| Protein sequence | MRYLDEFRDP AAAAVLVDAI RRRATKPWTV MEVCGGQTHS IIRNGIDQLL AGAVEFIHGP
GCPVCVTPLE MIDRALAIAA RPDVIFCSFG DMLRVPGSSQ DLFGVRARGG DVRIVYSPLD
ATRIAADNPD KQVVFFGVGF ETTAPANAMA VLHAQRLGLT NFSMLVSHVL VPPAMTAILS
SPTNRVQGFL AAGHVCSVMG TSEYEPLVTE FGVPIVVTGF EPLDLLEGVR QVVELLEEGT
PALRNAYPRA VSAEGNLVAQ KTLAEVFAVT DRQWRGIGMI PRSGWTLSPR YAEFDAERRF
GVGHLQVAES SDCRSGEVLQ GLLKPNECPA FGRTCTPRTP LGATMVSSEG ACAAYYQFRR
LETAAHA
|
|---|
| |