Gene Mvan_2352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2352 
Symbol 
ID4648022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2511721 
End bp2512614 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID639805836 
ProductBeta-lactamase 
Protein accessionYP_953172 
Protein GI120403343 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00445844 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGAAT TCTCCCGAAG GCATGTGTTG TTCGGCGGGG TATCGCTGGC GGCGTTGGCC 
GCGTGTTCCC CGCAGACCGT TCTCGCCGAC CCGGTCGAGC CGCTGCCTCC GCTGGACCAA
CGCATAGAGG CGCTCGGACA GCGACACAAC GCTCAGATCG GTTTGTATGC ACTGGATCTG
GACACGCAGC GGGGTATCGA GTTCGGTGCT GACGAACCTT TCGCGATGTG CTCGACGTTC
AAGGCCTACG CCGCGGCGGC GGTGCTGCAG CGGACCCAGA CGGGTGAGCT GACGCTCAAC
GACGCGATCC CGATCGAGCC CGGGGACATC CGTCCCCATT CGCCGGTGAC CGAGCCGCGG
GTGGGGACGT CGATGTCGTT GGCCGAGTTG TGTCAGGCCG CGCTGCAGCA GAGCGACAAC
GCAGCGGCCA ACGGTCTGCT GCGCGTGCTG GGCGGCCCGC AGGCGATCAC CGCGTTCGCA
CGCAGCATCG GCGACCACCG CACGCGGTTG GACCGCTGGG AGGTCGAGTT GAATTCCGCG
CTGCCGGGGG ATCCGAGGGA CACCAGCACG CCGCGTGCGC TGGGTGACGG TTACCGCAAC
ATCCTGACCG GCGACGTGCT GAATCCGCCG ACCCGCCGAC AGCTCCTGGA CTGGATGCTG
GCCAATCAGA CCTCGAGCAT GCGCGCGGGC CTGCCCGCCG GATACACCAG CGCGGACAAG
ACGGGTAGCG GGGATTACGG CACCACCAAC GATGTCGGCG TGGCGTACGG TCCTGCCGGG
CAGCAGGTGC TGCTGTCGCT GATGACCAGG TCCGCGATCG ATGACCCCGA CGCCCCGAGT
CTGCGCCCGC TCATCGGTGA GCTGGCAGCG CTGGCGCTGT CCGAACTAGG TTAG
 
Protein sequence
MTEFSRRHVL FGGVSLAALA ACSPQTVLAD PVEPLPPLDQ RIEALGQRHN AQIGLYALDL 
DTQRGIEFGA DEPFAMCSTF KAYAAAAVLQ RTQTGELTLN DAIPIEPGDI RPHSPVTEPR
VGTSMSLAEL CQAALQQSDN AAANGLLRVL GGPQAITAFA RSIGDHRTRL DRWEVELNSA
LPGDPRDTST PRALGDGYRN ILTGDVLNPP TRRQLLDWML ANQTSSMRAG LPAGYTSADK
TGSGDYGTTN DVGVAYGPAG QQVLLSLMTR SAIDDPDAPS LRPLIGELAA LALSELG