| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2350 |
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| Symbol | |
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| ID | 4648020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 2508105 |
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| End bp | 2510369 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639805834 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_953170 |
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| Protein GI | 120403341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.78802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00350864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTGTAG TTGAAATTGA AGACGGCGTG TTCGAATCCA CCGCCACCAT CGACAACGGG
AGCTTCGGCA CCCGCACCAT TCGCTTCGAG GCCGGCCGGC TGGCCCAGCA GGCTGCCGGA
GCCGTCGTCG CCTACCTCGA CGACGAGACC ATGCTGCTGA GCGCGACGAC CGCCAGCAAG
AGCCCCAAAG AGCACTTCGA CTTCTTCCCG TTGACCATCG ACGTCGAGGA GCGCATGTAC
GCCGCGGGCC GCATCCCCGG CTCGTTCTTC CGCCGCGAGG GTCGCCCGTC CACCGACGCG
ATCCTGACCT GCCGCCTGAT CGACCGGCCG CTGCGCCCGT CGTTCGTCAG CGGTCTGCGC
AACGAGATCC AGGTCGTGGT CACGGTGCTG AGCCTGGATC CCAAGGATCT CTACGACGTG
CTCGCCATCA ACGCCGCATC GGCGTCGACC CAGATCTCCG GCCTGCCGTT CTCCGGTCCG
GTCGGCGGTG TGCGCGTCGC CCTGATCGAC GGCCAGTGGG TGGCGTTCCC GACCGTCGAG
CAGCTCGAGC GGGCCGTGTT CGACATGGTC GTCGCCGGCC GCAAAGTTGG GGATGACCAC
AAAGACGTCG CGATCATGAT GGTCGAGGCC GAGGCCACCG AGAACGTCAT CGAACTCGTC
GCCGGTGGTG CGGGTGCACC CACCGAGACG GTCGTGGCCG AGGGCCTTGA GGCCGCCAAG
CCGTTCATCG CCGTGCTGTG CGACGCCCAG GCCGCGTTGG CCGGTGCCGC CGGCAAGGAG
ACGGCCGAGT ACCCGCTGTT CCCCGATTAT GGCGACGACG TCTACTACTC CGTCGCCTCG
GTGGCCACCG AGGCGCTGTC GGAGGCGCTG ACCATCGCGG GCAAGAACGA GCGCAACGAC
CGCACCGACG AGATCAAGGT CGAGGTCCTC AACCGGCTCG CCGAGCAGTA CGCCGGACGT
GAGAAGGAGA TCGGCGCCGC CTACCGCTCG CTGACCAAAA AGCTTGTCCG CCAGCGCATC
CTGACCGACC ACTTCCGCAT CGACGGCCGC GGCGTCACTG ACATCCGCGC CCTGTCTGCC
GAGGTCGCGG TGGTTCCGCG GGCGCACGGC AGCGCGCTGT TCGAGCGTGG CGAGACCCAG
ATCATGGGTG TCACCACGTT GGACATGGTC AAGATGGCCC AGCAGATCGA CTCGCTGGGC
CCGGAGACCT CCAAGCGCTA CATGCACCAC TACAACTTCC CGCCGTACTC GACCGGTGAG
ACCGGCCGCG TCGGCTCGCC GAAGCGCCGC GAGATCGGCC ACGGTGCGCT CGCCGAGCGT
GCCCTGGTGC CGGTGCTGCC CAGCGTCGAG GAGTTCCCGT ACGCGATCCG TCAGGTGTCG
GAGGCGTTGG GCTCCAACGG TTCGACCTCG ATGGGCTCGG TGTGTGCCTC GACGTTGTCG
CTGCTGAACG CCGGTGTGCC GCTGAAGGCT CCGGTCGCCG GCATCGCGAT GGGTCTCGTC
TCTGACGACA TTGAAATTGA CGGCAAGACC GAGCGTCGCT TCGTCACGCT GACCGACATC
CTCGGCGCCG AGGACGCGTT CGGCGACATG GACTTCAAGT GCGCGGGCAC CAAGGACTTC
GTCACCGCCC TGCAGCTGGA CACCAAGCTC GACGGTATTC CCTCCCAGGT GCTGGCAGGT
GCCCTCGCGC AGGCCAAGGA CGCCCGGATC ACCATCCTCG AGGTGATGGC CGAGGCCATC
GACACCCCCG ACGAGATGAG CCCGTACGCA CCGCGCATCA CCACGATCAA GGTGCCCGTC
GACAAGATCG GCGAGGTCAT CGGGCCCAAG GGCAAGATGA TCAACTCGAT CACCGAGGAG
ACCGGCGCGT CGATCTCGAT CGAGGACGAC GGCACCGTGT TCGTCGGCGC CAGCAATGGC
GAGGCGGCAC AGGCGGCGAT CGACAAGATC AACGCCATCG CCAACCCGCA GCTGCCCAAG
GTCGGCGAGC GCTTCCTCGG CACGGTGGTG AAGACCACCG ACTTTGGAGC TTTCGTTTCC
TTGTTGCCGG GCCGTGACGG TCTGGTGCAC ATCTCCAAGT TGGGCCGCGG CAAGCGGATC
AACAAGGTCG AGGACGTGGC GAAGGTCGGC GACAAGCTGC GCGTGGAGAT CGCCGACATC
GACAACCGCG GCAAGATCTC GCTGGTCCTG GTCGCCGAAG AGAGCGAGAC GGCAGCCGAC
GCACCCGCTG ACGCACCGGT CGATGCAGCG ACGACAAGCA GCTAG
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| Protein sequence | MSVVEIEDGV FESTATIDNG SFGTRTIRFE AGRLAQQAAG AVVAYLDDET MLLSATTASK
SPKEHFDFFP LTIDVEERMY AAGRIPGSFF RREGRPSTDA ILTCRLIDRP LRPSFVSGLR
NEIQVVVTVL SLDPKDLYDV LAINAASAST QISGLPFSGP VGGVRVALID GQWVAFPTVE
QLERAVFDMV VAGRKVGDDH KDVAIMMVEA EATENVIELV AGGAGAPTET VVAEGLEAAK
PFIAVLCDAQ AALAGAAGKE TAEYPLFPDY GDDVYYSVAS VATEALSEAL TIAGKNERND
RTDEIKVEVL NRLAEQYAGR EKEIGAAYRS LTKKLVRQRI LTDHFRIDGR GVTDIRALSA
EVAVVPRAHG SALFERGETQ IMGVTTLDMV KMAQQIDSLG PETSKRYMHH YNFPPYSTGE
TGRVGSPKRR EIGHGALAER ALVPVLPSVE EFPYAIRQVS EALGSNGSTS MGSVCASTLS
LLNAGVPLKA PVAGIAMGLV SDDIEIDGKT ERRFVTLTDI LGAEDAFGDM DFKCAGTKDF
VTALQLDTKL DGIPSQVLAG ALAQAKDARI TILEVMAEAI DTPDEMSPYA PRITTIKVPV
DKIGEVIGPK GKMINSITEE TGASISIEDD GTVFVGASNG EAAQAAIDKI NAIANPQLPK
VGERFLGTVV KTTDFGAFVS LLPGRDGLVH ISKLGRGKRI NKVEDVAKVG DKLRVEIADI
DNRGKISLVL VAEESETAAD APADAPVDAA TTSS
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