Gene Mvan_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2300 
Symbol 
ID4644335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2454925 
End bp2456481 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content68% 
IMG OID639805784 
Productmalate:quinone oxidoreductase 
Protein accessionYP_953120 
Protein GI120403291 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.671503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.184935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGAAC CACACAAGAC CGACGTCCTG CTGGTCGGAG CGGGCATCAT GAGCGCCACC 
CTCAGTGCGC TGCTGCGTTT GGTGGAACCG AACTGGTCGA TGACGTTGGT CGAGCGCCTC
GACGGTGCGG CCGCCGAGAG CAGCGATCCG TGGAACAACG CGGGCACGGG CCACTCGGCG
CTGTGTGAGC TGAACTACAC GCCGGCCCGG CCCGACGGCT CCATCGACAT CACCAAGGCG
GTGAGCGTCA ACGAGCAGTT CCAGGTGTCG CGGCAGTTCT GGACCTACGC CGTCGAGAAC
GGCGTGCTGC CCGACGTGCG CAGCTTCCTC AACCCGATCC CGCACGTCAG CTTCGTCACC
GGCGCGGACA ACGTGCAGTA CCTGCGCAGG CGCTACGACG CACTGGTCAC CAACCCACTG
TTCGCGACGA TGGAGTACAT CGACGACAGT GACGAGTTCG CGCGCCGGCT GCCGTTGATG
GCCGAGAAGC GTGACTTCTC GAACCCGGTC GGGCTCAACT GGACCCAGGA CGGCACCGAC
GTCGACTTCG GATCGCTGTC GCGGCAACTC CTCGGGTTCG GCGCCAAGCA CGGCATGACC
ACCCTGTTCG GGCACGAGGT GGTCAACCTC ACCCAGGGCT CCGACGGCAC GTGGACGGTC
AAGATCGCCA ACCGCCGCAC CGGGCAGAAA CGCACCATCA ACGCCAAGTT CGTCTTCGTC
GGCGCCGGCG GCGGCGCGCT GCCGCTGCTG CAGAAGGCCG GCATCAAGGA GGCCAAGGGA
TTCGGCGGCT TCCCGGTCGG CGGCCAGTGG CTGCGCACCG GCAATCAGGA CCTGACGGCG
CGGCACCAGG CGAAGGTGTA CGGCTTGCCG CCGCTGGGCG CCCCGCCGAT GTCGGTGCCC
CACCTGGACA CCCGCGTGAT CAACGAGAAG TCGTGGTTGC TGTTCGGCCC GTTCGCCGGG
TGGTCGCCGA AGTTCCTCAA GCAGGGCAAG GTCACCGACC TGCCGTTCTC GGTCAGGCCC
GACAACCTGG TCTCGATGCT GGGCGTCGGC CTCACCGAGA TGGGGCTGCT GAAGTACCTG
ATCGGCCAGC TGCTGCTCAG TGAGTCGGCC CGCGTCGAGA ATCTGCGTGA CTTCGCGCCC
AGCGCAAGGG ATTCCGACTG GGAGCTGGAT ATCGCGGGGC AGCGCGTGCA GGTGATCCGC
AAGGCCAAGG GCAAGGGCGG GGTGCTGGAG TTCGGGACGA CGGTGCTCGC GGCCGCCGAC
GGCAGCATCG CCGGATTGCT CGGCGCGTCC CCAGGCGCGT CGACGGCGGT GCCGGCGATG
TTCGACGTCA TGAAGCGGTG CTTCTCGGAC CGGTACCCGA GCTGGGAGCC CAAACTCAAG
GAGATGGTCC CGTCGCTCGG TACCGCACTG TCCGACGAAC CCAAACTCTT CGAAGAGGTG
TGGGCGCACG GGACCGCGGT GCTCAAACTG GACAAGCCCG CCAGCAGCAT CCCCGCCACC
ACCGCCGACG AATCGACGGC CGGCACCGAG CATTCCCCGG CCGCGGCCAC CGTCTGA
 
Protein sequence
MSEPHKTDVL LVGAGIMSAT LSALLRLVEP NWSMTLVERL DGAAAESSDP WNNAGTGHSA 
LCELNYTPAR PDGSIDITKA VSVNEQFQVS RQFWTYAVEN GVLPDVRSFL NPIPHVSFVT
GADNVQYLRR RYDALVTNPL FATMEYIDDS DEFARRLPLM AEKRDFSNPV GLNWTQDGTD
VDFGSLSRQL LGFGAKHGMT TLFGHEVVNL TQGSDGTWTV KIANRRTGQK RTINAKFVFV
GAGGGALPLL QKAGIKEAKG FGGFPVGGQW LRTGNQDLTA RHQAKVYGLP PLGAPPMSVP
HLDTRVINEK SWLLFGPFAG WSPKFLKQGK VTDLPFSVRP DNLVSMLGVG LTEMGLLKYL
IGQLLLSESA RVENLRDFAP SARDSDWELD IAGQRVQVIR KAKGKGGVLE FGTTVLAAAD
GSIAGLLGAS PGASTAVPAM FDVMKRCFSD RYPSWEPKLK EMVPSLGTAL SDEPKLFEEV
WAHGTAVLKL DKPASSIPAT TADESTAGTE HSPAAATV