Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2171 |
Symbol | rnc |
ID | 4645546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2318175 |
End bp | 2318882 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639805656 |
Product | ribonuclease III |
Protein accession | YP_952992 |
Protein GI | 120403163 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGTCG ATCGCGCGCT TCTTCTGGAG GCGCTCGGTG TCGATCTGCC CGGTGAGCTG CTCACCATCG CCCTCACCCA CCGCAGCTAC TCCTACGAGA ACGGGGGCGT GCCGACCAAC GAGCGCCTCG AGTTCCTCGG CGACTCGGTG CTCGGACTGA CGATCACCGA AGAGCTCTAC CACCGTCACC CCGACCGCTC CGAAGGTGAT CTGGCCAAGC TGCGGGCCAG CATCGTCAAC ACCCAGGCGC TGGCCGACGT GGGCCGCAAT CTCACCGAGC ACGGTCTCGG CGCCTATCTG TTGCTCGGCA AGGGCGAGGA GAACTCCGGT GGCGCCGACA AGTCGAGCAT CCTTGCCGAT GGCGTCGAAT CCCTTTTGGG CGCAATCTAT CTGGAGTGCG GCGGAGAGGT CGCCCGGGAG GTCATCCTGC GGCTGTTCAG CAGTCTGCTG GACACCGCGC CGACACTGGG CGCTGGGTTG GACTGGAAGA GCAGCCTGCA GGAGCTGACC GCGTCGCGGG GCCTCGGAGC GCCGACCTAT GTCGTCACGT CGACCGGGCC CGATCACGAC AAGGAGTTCA CGGCGGCGGT CATGGTCGGT GACAGCGAGT GCGGCAGGGG CGTCGGCCGG ACCAAGAAAG AGGCCGAACT CAAGGCGGCC GCGGCGGCAT GGCACGCCCT CACAGGTGAT CTGACGTCGG CGGACTGA
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Protein sequence | MTVDRALLLE ALGVDLPGEL LTIALTHRSY SYENGGVPTN ERLEFLGDSV LGLTITEELY HRHPDRSEGD LAKLRASIVN TQALADVGRN LTEHGLGAYL LLGKGEENSG GADKSSILAD GVESLLGAIY LECGGEVARE VILRLFSSLL DTAPTLGAGL DWKSSLQELT ASRGLGAPTY VVTSTGPDHD KEFTAAVMVG DSECGRGVGR TKKEAELKAA AAAWHALTGD LTSAD
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