Gene Mvan_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2171 
Symbolrnc 
ID4645546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2318175 
End bp2318882 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID639805656 
Productribonuclease III 
Protein accessionYP_952992 
Protein GI120403163 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTCG ATCGCGCGCT TCTTCTGGAG GCGCTCGGTG TCGATCTGCC CGGTGAGCTG 
CTCACCATCG CCCTCACCCA CCGCAGCTAC TCCTACGAGA ACGGGGGCGT GCCGACCAAC
GAGCGCCTCG AGTTCCTCGG CGACTCGGTG CTCGGACTGA CGATCACCGA AGAGCTCTAC
CACCGTCACC CCGACCGCTC CGAAGGTGAT CTGGCCAAGC TGCGGGCCAG CATCGTCAAC
ACCCAGGCGC TGGCCGACGT GGGCCGCAAT CTCACCGAGC ACGGTCTCGG CGCCTATCTG
TTGCTCGGCA AGGGCGAGGA GAACTCCGGT GGCGCCGACA AGTCGAGCAT CCTTGCCGAT
GGCGTCGAAT CCCTTTTGGG CGCAATCTAT CTGGAGTGCG GCGGAGAGGT CGCCCGGGAG
GTCATCCTGC GGCTGTTCAG CAGTCTGCTG GACACCGCGC CGACACTGGG CGCTGGGTTG
GACTGGAAGA GCAGCCTGCA GGAGCTGACC GCGTCGCGGG GCCTCGGAGC GCCGACCTAT
GTCGTCACGT CGACCGGGCC CGATCACGAC AAGGAGTTCA CGGCGGCGGT CATGGTCGGT
GACAGCGAGT GCGGCAGGGG CGTCGGCCGG ACCAAGAAAG AGGCCGAACT CAAGGCGGCC
GCGGCGGCAT GGCACGCCCT CACAGGTGAT CTGACGTCGG CGGACTGA
 
Protein sequence
MTVDRALLLE ALGVDLPGEL LTIALTHRSY SYENGGVPTN ERLEFLGDSV LGLTITEELY 
HRHPDRSEGD LAKLRASIVN TQALADVGRN LTEHGLGAYL LLGKGEENSG GADKSSILAD
GVESLLGAIY LECGGEVARE VILRLFSSLL DTAPTLGAGL DWKSSLQELT ASRGLGAPTY
VVTSTGPDHD KEFTAAVMVG DSECGRGVGR TKKEAELKAA AAAWHALTGD LTSAD