Gene Mvan_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2110 
Symbol 
ID4647286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2250821 
End bp2252470 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content68% 
IMG OID639805593 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_952931 
Protein GI120403102 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.333319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCT TGAGCCCCTT CCCCGAAGTC GACATCCCCA CCGCCAGCGT CTACGACTAC 
CTGTTCTCCG GGTTGGCGGG CCCCGAGGAC AGCGTCCTGG ACCGCGTCGC GTTGATCGAC
GCGAAATCCG GCAGGCAGAC CACCTACCGC GAGATGGTGG CCAGGATCGA TTCGTTCGCC
GGCGCACTGG CCGCCCGCGG GATCGGCGTC GGCGACGTCG TCGCCCTGCT GGCCCCGAAC
AGCTCGGTGT TCGCCGTCGC GTTCCACGGC ATCCTGCGGG CCGGTGCGAC GGCGACGACG
GTCAACGCGC TTTTCACCGC CAAGGACATC GCCAAGCAGC TGACCGACTC GAAGGCCACG
ATGCTGGTCA CCGTCGCGGC GCTGCTCCCC CAGGCCAAGG CGGGTGCAGC GGCGGCCGGC
CTCTCGGACG AGGACGTGGT GGTGCTCGAC GGCGCGGGCC GCGACGGCTC CGGCGAGGGC
GCCGGCCATC CCAACGCGGC GGATCTGCTG GCCGCGGGAA CCCCTGCGCC GCAAGTCGAC
TTCGCGCCGT CGTCACATCT GGCGGTGCTG CCGTACAGCT CGGGGACCAC CGGGAATCCC
AAGGGCGTCA TGCTCACACA CCGCAATCTG GTCGCCAACG TCGCCCAGAT CCGCCCGCTG
CACGGCATGG TCGCCGACGA CGTGGTGCTG GCCGTGCTGC CGTTCTTCCA CATCTACGGG
ATGACGGTGC TGCTCAACGC CGCCCTGCAC GCGCGGGCCC GGCTGGTCAT CATGCCGAGC
TTCGACCTGG GCGAGTTCCT CGGCAACATC GCCGAGCACC GGTGCACCAT CGCATTCATC
GCACCCCCGG TGGCGGTGGC GCTGGCGAAG CACCCGCTCG TCGACGAGCA CGATCTGTCG
TCGCTCAACG TCGTCATGTC GGGGGCCGCA CCCCTGGACG CCGACCTCGG CCACGCCGTC
GCGAAACGCC TGGGCTGCAA GGTCGTTCAG GGTTACGGCA TGAGTGAGCT CAGCCCCGTC
AGCCACATCA CCCCGTTCGA CGGCGGCCTT GTCGACATGC ACGAGGACGC GCCGCTGAGC
TCGGTCGGGT GGACGGTCTC CAACGCCGCG TCCAAACTCG TCGATCCCGA GACCGGTGAC
GAGATCCCCA TCCCCGAAGA GGGTTTGAGT AAAACCGGCG AACTGTGGTT CAAGGGGCCC
AACGTGATGG CCGGATACCT CAACAACGAC GAGGCCACCA GGTCCACCAT CGACGAGGAC
GGCTGGCTGC ACACCGGCGA TCTCGCCCAG GTCGACGCCA GAGGCCTGGT GTACATCGTC
GACCGGCTCA AGGAGCTGAT CAAGTACAAG GGCTACCAGG TGCCGCCTGC CGAGTTGGAG
GCCCTGCTGC TGTCGCATCC CGGGATCGCC GACGCGGCAG TGGTCGGCGT GCACGACGAG
GAAGGCGAAG AGGTGCCGAA AGCGTTCGTG GTGCGGCAGG CCTCGACGGA CGCCGACGGC
GGCGCCGCGC TGACCGAGGC CGACGTCATC GAGTTCGTCG CGGGCCAGGT CGCCCCGTAC
AAGAAGGTCC GTCAGGTCGA GTTCATCGAC GCGATCCCGA AATCGGCGTC GGGCAAGATC
CTTCGCAAGG ACCTACGCAA CGGCGGCTAG
 
Protein sequence
MTFLSPFPEV DIPTASVYDY LFSGLAGPED SVLDRVALID AKSGRQTTYR EMVARIDSFA 
GALAARGIGV GDVVALLAPN SSVFAVAFHG ILRAGATATT VNALFTAKDI AKQLTDSKAT
MLVTVAALLP QAKAGAAAAG LSDEDVVVLD GAGRDGSGEG AGHPNAADLL AAGTPAPQVD
FAPSSHLAVL PYSSGTTGNP KGVMLTHRNL VANVAQIRPL HGMVADDVVL AVLPFFHIYG
MTVLLNAALH ARARLVIMPS FDLGEFLGNI AEHRCTIAFI APPVAVALAK HPLVDEHDLS
SLNVVMSGAA PLDADLGHAV AKRLGCKVVQ GYGMSELSPV SHITPFDGGL VDMHEDAPLS
SVGWTVSNAA SKLVDPETGD EIPIPEEGLS KTGELWFKGP NVMAGYLNND EATRSTIDED
GWLHTGDLAQ VDARGLVYIV DRLKELIKYK GYQVPPAELE ALLLSHPGIA DAAVVGVHDE
EGEEVPKAFV VRQASTDADG GAALTEADVI EFVAGQVAPY KKVRQVEFID AIPKSASGKI
LRKDLRNGG