| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2109 |
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| Symbol | |
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| ID | 4647285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 2249015 |
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| End bp | 2250814 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639805592 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_952930 |
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| Protein GI | 120403101 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.161845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCTG GATTCACGGG GTTGATGCTG TTGGCGGGGA AGCTCTCGAG CCGCGGCGCC
GACTGCCGTC CGGACGGCGA GAGCGCACGC CTGCTGGCGC TGGAATCGTT CGAGATCCTC
GACACTGTGC CGGAGACGCC GTTCGACGGC CTGACGGCGT TGGCCGCCTA TGTGTGCGGC
GCTCCGATGG CGCTGCTCAG CTTCGTGGAT GCCACGCGTC AGTGGATCAA GTCACGGCAC
GGCGTCGACG TCGCCGAGAT CGATCGCGAG GTGTCGTTCT GTGCCCGCAC CCTCGCGGCC
GCGTCCCTTC TGGAGATCCC CGACACCCAC CTGGATCCGC GGTTCGCCCC CCACCCGATG
GTGACCGGCG ATCCGCACGT GCGCTTCTAC GCCGGCGTGC CGATCGTCAC CGGCGACGGC
CATGCGCTGG GCGCCCTCTG CGTCATGGAC CGCGAGCCCC GCACCCTGTC CGATCCTCAG
CGCGTCCACC TGCAGACGCT GGCCGATCAG GTGCTCACCC TGCTGCAGCT GCGCAGCCGG
ACCCGCCAGA CCGCCTCCGA GATCGATCGC AGGCTGGCTG CCGATGCGGC GCTGCGCCAG
CAGCAGCGCA TGCTCGAGGC CGTGCTGGAG CACACCGACG TCCTCATCTT CGCCAAGGAC
GTCGACGGCC GATTCGTGAT GGCCAATCGC GCGCTGGAGC ACGTCACGCG GGCCGAGAGC
ACTCTGATCG GGTTCACCGA CCACGACTTC TTCGACGCCG AGATCGCCGA CGACTACCGC
CGCAACGACC GGCGCATCAT GGCCGGCAGA GAATGGCAGG TCTTCAGCGA GGAGGTCGTC
CACCCGGACG GATCCGTGCA CACCTACCGG TCGACCAAGT TCCCGCTGTT CGACGACGGC
GGGGAAGTGA TCGGTACCGG GGGAGTGTCG ACGGACGTCA CCGAGCTGGT GGCGGCGCGG
GCAGCACACG CGGCCGCCGA ACAGCGGTGG CGGGCCCTGG TCGAGCAGTC GCCCGCCGCG
GTGATCGTCA TCGACAGGGA CGGCGGACTC TCCTACGTCA ACCCGGAAGC CGTCACGCTG
CTCGGCGGGG AGACGGCCGA GCAGATCACC GCGCAGCCCG GGCTGGACTT TGTGCCCGCA
CACCTGCGCG CCGCCGCGCA GACGCTGCTC GAGGTGGCGC TGTCCGGAGG AACCCCGGCG
CGTTCCCAGC GCGGGTTGCT GCGCCGGGTG GACGGCACTG TGATCGCGGT GGAGTTCAAC
GGCACCGTCG TCGACCATTC CGACGAGCGC AGCGTGCAAC TCGAAGTTCG CGACGTGTCC
GCCGACGCGG CCGCCCATGC CGCCCTGAAA CTGTCCGCCT CGACCGATCC GCTGACGGGT
GCCCTCAACC GACGCGGCTG GGATGCCCGG GTGGCGGCCC TGCTCGCCGA CGGCGCCGCC
ATGACGGTCG CGGTCCTCGA CCTGGACAAC TTCAAGTCGT ACAACGACGC GCACGGCCAC
ACCGCGGGAG ACGCGCTGCT GCAGAACTTC GCGGCGGCCG CGGGGGCCTC GATCCGGGAC
GGTGACGTGT TCGCGCGCTG GGGTGGCGAG GAATTCATCG TCGCCCTGCC CGACACGACG
CCCGATCAGG CCGAGAGGAT CCTGAACCGG CTCCGCAACT GCGTGCCCTA CGGGCAGACC
TGCTCGATCG GGTACACCGC CCACACGCCC GCCGATACGT TGACCGACAC CGTGGCCCGC
GCCGACAAGG CGCTCTACGA GGCCAAGAGC CGGGGCAGGA ATCAGCTCCG GCTGCTGTAG
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| Protein sequence | MSAGFTGLML LAGKLSSRGA DCRPDGESAR LLALESFEIL DTVPETPFDG LTALAAYVCG
APMALLSFVD ATRQWIKSRH GVDVAEIDRE VSFCARTLAA ASLLEIPDTH LDPRFAPHPM
VTGDPHVRFY AGVPIVTGDG HALGALCVMD REPRTLSDPQ RVHLQTLADQ VLTLLQLRSR
TRQTASEIDR RLAADAALRQ QQRMLEAVLE HTDVLIFAKD VDGRFVMANR ALEHVTRAES
TLIGFTDHDF FDAEIADDYR RNDRRIMAGR EWQVFSEEVV HPDGSVHTYR STKFPLFDDG
GEVIGTGGVS TDVTELVAAR AAHAAAEQRW RALVEQSPAA VIVIDRDGGL SYVNPEAVTL
LGGETAEQIT AQPGLDFVPA HLRAAAQTLL EVALSGGTPA RSQRGLLRRV DGTVIAVEFN
GTVVDHSDER SVQLEVRDVS ADAAAHAALK LSASTDPLTG ALNRRGWDAR VAALLADGAA
MTVAVLDLDN FKSYNDAHGH TAGDALLQNF AAAAGASIRD GDVFARWGGE EFIVALPDTT
PDQAERILNR LRNCVPYGQT CSIGYTAHTP ADTLTDTVAR ADKALYEAKS RGRNQLRLL
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