Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2045 |
Symbol | |
ID | 4647246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2185674 |
End bp | 2186387 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639805530 |
Product | LysR family transcriptional regulator |
Protein accession | YP_952868 |
Protein GI | 120403039 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.416404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.715968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGGT GCTCACTCAC CCTCGGATAC GTCCCCGGCG GGACGCCCGC GAAGTGGGCC AGGATCTGGG CGGAGCGCCA CCCCGAGGCT CCGCTGCAGT TGCGCACCCT CGCCGCGGCA GACGCGGCCG CTGAAGTACG GGCCGGCATC GTCGACGTGG CAGTGCTCCG GTTGCCGGCC GACACGTCCG GGCTGTCGGT CATCCCTCTC TACGAGGAGA CCACGGTGGC CGTGGTGCCG ACCGACCACA TCCTCACTGC CGCCGACGAG ATCACCGCCG CGGACCTCGA CGGCGAGCCG GTTCTGCTGC CACTCGACAA CGTCGTCGCC TGGGCGGACG CTCCAGGCGA CCCGGTCCAT CACCGACCCG AAACCACCTC GGATGCAATC GAACTCGTGG CCGCGGGGGT CGGTGCGCTC ATCGTTCCAC AGTCGCTGGC GCGGCTGTAT CACCGCAAGG ACCTCACGTA CCGCGCCATC GCCGACGCGC CCACATGCCC CGTGGCGCTC GCCTTCCCGG AAGGGGCGCA GTCGCCGCTG GTCGAGGAGT TCATCGGGAT TGTGCGGGGC CGTAAACCCG GTTCGTCGCG CGGGCAGGCC CAGTCGGCAC CGAAACGCAC CGCACGGGAG AAAACCCTCG CGAAGCAGGC CGCCCGCGCT GCTGCCGGCA AGGTCGCCCG CAAGCCGGGC CGCGCCGAGC GCGGTCGACG TTGA
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Protein sequence | MTRCSLTLGY VPGGTPAKWA RIWAERHPEA PLQLRTLAAA DAAAEVRAGI VDVAVLRLPA DTSGLSVIPL YEETTVAVVP TDHILTAADE ITAADLDGEP VLLPLDNVVA WADAPGDPVH HRPETTSDAI ELVAAGVGAL IVPQSLARLY HRKDLTYRAI ADAPTCPVAL AFPEGAQSPL VEEFIGIVRG RKPGSSRGQA QSAPKRTARE KTLAKQAARA AAGKVARKPG RAERGRR
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