Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2025 |
Symbol | ligB |
ID | 4647226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 2165517 |
End bp | 2167121 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639805510 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_952848 |
Protein GI | 120403019 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.189008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.878138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTGG TTGACGTTGC CAACGCGTCC GCCGACGTCG CGGCCATGTC GGCGCGGCTG GCCAAGGTCG CGCGCATCGC CGAGCTGCTG CGCACGGCCG GCCGACAGGG CGACGCGCGG CTCGTCCGCG TCGTCGTGTC CTGGCTGTCC GGCGAGCTGA CCCAGCGCCA GATCGGTGTC GGGTGGCGGT CCGTGCGCTC GGTGCCCGAC CCCGCCGCCC AACCGAGCCT CACGGTCGAG GACGTCGACG CCCGGTTCGG GGAGATCGGG TCCACCTCCG GCAAGGGGTC CCAGGCGCGC CGCGCGGCAC TGCTGGCTGA ACTCTTCGCT GCGGCCACCG CCGTCGAACA GGTTTTCCTG CGCCGCCTGC TCACCGGGGA ACTGCGCCAG GGCGCCCTCG GCGGGGTGAT GGCCGACGCG GTCGGCAAGG CCGCGGGCGT CCCCTCCGCC GTGGTGCGTC GCGCCGCGAT GCTGGGCGGG GACCTTCCCG CGGTCGCCGC CGCGGCCGTC ACCGACGGCG AGTCCGCCCT CGCACAATTC ACCCTGCAGG TCGGCAGGCC GGTGGGCCCG ATGCTGGCCC AGACCGCCAC CGGCGTCGCC GATGCGCTCG ACCGCTTCGG CGGGACGGCG CTGTTCGAGG CCAAGCTGGA CGGCGCGCGC GTGCAGATCC ACCGCCGCGG CGACGCGGTG TCGGTCTTCA CCCGCAGCCT CGACGACGTG ACGGCGCGGC TGCCCGAGGT GGTCGACGCG ACGCTGGCGC TGCCGGTCAC GGAGCTGATC GCCGATGCCG AGGCGATCGC ACTCAGACCC GACGGGCGTC CGCACCGGTT CCAGATCACC GCCTCACGCT TCGGCCGCCG CGGTGGTACG CCCGACGCGG GTACACAGAG GCTGTCGGTG TTCTTCTTCG ACCTGCTGCA CGCCGACGGG GTCGACCTGC TCGACCTGCC CACCGGCGAG CGCATCGCCA CGCTCGACGC GACGGTGCCC CGCGAGCAGC GCGTCGACCG CCTGTTGACC TCCGACCCGG AGGCCGCGCA GGCGTTTCTC GACGCGACAC TGGCCGCGGG ACACGAAGGC GTGATGGCCA AGTCGCCGAC CGCACCGTAC GAAGCCGGTC GACGCGGGGC GGGCTGGCTC AAGGTCAAAC CCGTGCACAC CCTCGACCTG GTGGTGCTCG CCGTGGAATG GGGATCGGGC CGGCGCACCG GCAAGCTGTC CAATATCCAT CTCGGTGCAC GCGACCCGGC GACCGGCGGT TTCGTCATGC TCGGCAAGAC GTTCAAGGGC ATGACCGATG AGATGCTGGC CTGGCAGACG GAACGCTTTC TCGAGTTGGC CGACGGAGCG GCCCCGGCCG CGACAGCAGA CCACGGAGCG GCCCCGGCCG CGACAGCAGA CCACGGAGCG GCGGATGGAT TCACCGTGAC GGTGCGGCCG GAGCAGGTCG TCGAGATCGC GTTCGACGGA ATCCAGACGT CCTCGCGTTA CCCCGGTGGG ATGGCGCTGC GCTTCGCCCG GGTGCTGTGC TACCGCGACG ACAAGACCGC AGCCGAGGCC GACACCATCG ACACGGTGCG TGCACTGCAC GAACGCGCGA ACTGA
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Protein sequence | MLLVDVANAS ADVAAMSARL AKVARIAELL RTAGRQGDAR LVRVVVSWLS GELTQRQIGV GWRSVRSVPD PAAQPSLTVE DVDARFGEIG STSGKGSQAR RAALLAELFA AATAVEQVFL RRLLTGELRQ GALGGVMADA VGKAAGVPSA VVRRAAMLGG DLPAVAAAAV TDGESALAQF TLQVGRPVGP MLAQTATGVA DALDRFGGTA LFEAKLDGAR VQIHRRGDAV SVFTRSLDDV TARLPEVVDA TLALPVTELI ADAEAIALRP DGRPHRFQIT ASRFGRRGGT PDAGTQRLSV FFFDLLHADG VDLLDLPTGE RIATLDATVP REQRVDRLLT SDPEAAQAFL DATLAAGHEG VMAKSPTAPY EAGRRGAGWL KVKPVHTLDL VVLAVEWGSG RRTGKLSNIH LGARDPATGG FVMLGKTFKG MTDEMLAWQT ERFLELADGA APAATADHGA APAATADHGA ADGFTVTVRP EQVVEIAFDG IQTSSRYPGG MALRFARVLC YRDDKTAAEA DTIDTVRALH ERAN
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