| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1997 |
|---|
| Symbol | |
|---|
| ID | 4645320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2132471 |
|---|
| End bp | 2133511 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639805483 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_952821 |
|---|
| Protein GI | 120402992 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.699907 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCGGT ACGAACTGCG CAGGCTGGAT TACAGCCTGT CCGAGGATCA TCAGGCACTG
CAGGCCGCCT ACAAGGACTT CTTCGCCACC CGCTGCACCA TCGAGACGGT GCGGGCGGCC
GAGGAAACCG GGTTCGACAA GAACCTCTGG GAACGGCTGT GCGCCATGGA CGCGACGACG
ATGGCGCTGC CGGAATCCGT TGGGGGCGAC GGGGCCACGC TGGTGGATCT GACCCTGGTC
GCCGAGGAGA TCGGCCGCTC ATTGGCTCCG GTGCCGTGGA TCGACCACAT CTGCGCGGCC
CGGCTGCTGG CACGCCTCGG CAGCGTCGAG GCCGACGTCG TGAACGGCCG GCAGATCGTC
GCCTTGGATC CCCTGCAGGA CAACGTGTCC GGGGTCAGGT TGATCCCGGC GGGTTCCGTC
GCGGACCACA TCATCGTGCG CGACGGGGAC GACGTGGTGC TCCTGAGCTT CTCGACGCGC
CCGGTGCGGG TGGACAACAT CGGCAAGCTG CCGATGGCGT GGGTGGATCC CGCCGCCGCG
GACAGCCGCA CCGTGTTGGC CAGCGGTGCC CAGGCATCGG CTGAATACCA ACTCGCACTC
GATGAATGGC GGCTCCTGAC GGGCGCCGCG CTGGTCGGTC TCGTCGAGGA GACGATGACC
ATCGCCGCCG AGTTCTCCAA GACCCGGTAC ACGCTCGGCG TGCCGATCTC GACATTGCAG
GCGATCTCGC ACCCACTGGC CAACATCGCG ATCACCGTGC AGGGCGGTCG CAACCTTGCG
CGGCGGGCAG CCTGGTTCCT CGACAACGAG CCCGGCGAAC GGCGCGAACT GGCGCCGTCG
GTGTTCGTGT TCATGGCCGA GGAGGCCGCC AAGGCCGCCA CCATGGCCGT CCACGTCCAA
GGTGGTCTCG GGGTGTCCGC GGAGGCAGCC GCCACCGCGT ACCTGGTGCG GGCACGGGGC
TGGGCGGTTG CCGGGGGAGA CCCGGGTGTG ACCGCCAAGT ACATCGCGCA GATCGTGGCT
GATCGTGAAG GACGGAGCTG A
|
|---|
| Protein sequence | MDRYELRRLD YSLSEDHQAL QAAYKDFFAT RCTIETVRAA EETGFDKNLW ERLCAMDATT
MALPESVGGD GATLVDLTLV AEEIGRSLAP VPWIDHICAA RLLARLGSVE ADVVNGRQIV
ALDPLQDNVS GVRLIPAGSV ADHIIVRDGD DVVLLSFSTR PVRVDNIGKL PMAWVDPAAA
DSRTVLASGA QASAEYQLAL DEWRLLTGAA LVGLVEETMT IAAEFSKTRY TLGVPISTLQ
AISHPLANIA ITVQGGRNLA RRAAWFLDNE PGERRELAPS VFVFMAEEAA KAATMAVHVQ
GGLGVSAEAA ATAYLVRARG WAVAGGDPGV TAKYIAQIVA DREGRS
|
|---|
| |