Gene Mvan_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1964 
Symbol 
ID4645811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2095696 
End bp2096838 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID639805451 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_952789 
Protein GI120402960 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.188217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCA AACTCAACGA CGAACAGGAA TTGTTGCGCA GCGGGCTCAC CAGGTTTCTG 
GCCACCCGCT ACGACCTGGA GAAGAGCCGC GCGGCGGCCA AGACCGGCCT CGGCTGGCAG
CCCGAGATCT GGCGTGCCTT CGCCGAAGAA CTCGGTATCC TCGGCGCCGC GCTGCCCGAG
GAGAACGGCG GCATCGGAGG CGGACCGGTG GAGATGATGC TGATCGCCGA AGCGCTGGGA
CACGCGCTCG TGGTCGAACC TTACGTCGAC ACCGCCGTCG TGGCCGCCGG GCTACTGCTG
CGCGCCGGGG GTGACACCGC CACCGCGCTG CTGGAGGAGA TCGTCGCCGG CACCGCGATC
GTGTCGCTGG CCGCCACCGA ACCCACCTCC GGCGAGTTCT GGCAGGACGT CACCACCAGC
GCCACCCGCG ACGGTGACAG CTGGGTCCTG AGGGGACAGA AGATCGTTTC GGCGAGCACC
CCGCTGGCCA GTCACGTGCT GGTCACCGCG CGCACGTCGG GCGAACGAGC CGACGCGGAA
GGCATCTCGC TGTTCCTTGT CGAACTCGGT TCGGCCGCAA CGGATATCGA GCTGCACCAC
TATCGCACGG TCGACGATCG ACGCGCCTCC GACATCGTGT TCGACGGTCT GCGGCTACCG
TCGACGGCGC TGTTGGGCGC CGAAGGCGGT GCGTGGCCGT CGATCGCCCT GGCTCGCGAC
GAGGGCGCCG CGGCGATCTG CGCCGAGGCG GTCGGCTGCA TGCGCAAGGT GCTGGCCGAC
ACCGTCGAAT ATTGCAAGCA GCGCCAGCAG TTCGGCCAAT CCATCGGAAG CTTCCAGGTG
TTGCAGCACC GCATGGTCGA CATGTACATG GAAGTCGAAC AGTCCGCGGC GGCGGTGCTG
CTGGCGGTCC TCAAGCTCGA CAGCGACGAC GTCACCCGCG CCAGAGCGGT CTCGGCCGCC
AAGGCGACGG TCGGGCGCGC CGCACAGTTC GTCGGCCAAC AGGCGGTGCA ACTGCACGGC
GGTATGGGCA TGACCGAAGA ACTGGCGATC GGCCATTACT TCAAGCGGCT GACCGCCCTA
CAGTTCGAGT TCGGGTCCAC CGACCACCAC GTCACCCGGT ATGCCCGGCT GACCAATCGC
TGA
 
Protein sequence
MDFKLNDEQE LLRSGLTRFL ATRYDLEKSR AAAKTGLGWQ PEIWRAFAEE LGILGAALPE 
ENGGIGGGPV EMMLIAEALG HALVVEPYVD TAVVAAGLLL RAGGDTATAL LEEIVAGTAI
VSLAATEPTS GEFWQDVTTS ATRDGDSWVL RGQKIVSAST PLASHVLVTA RTSGERADAE
GISLFLVELG SAATDIELHH YRTVDDRRAS DIVFDGLRLP STALLGAEGG AWPSIALARD
EGAAAICAEA VGCMRKVLAD TVEYCKQRQQ FGQSIGSFQV LQHRMVDMYM EVEQSAAAVL
LAVLKLDSDD VTRARAVSAA KATVGRAAQF VGQQAVQLHG GMGMTEELAI GHYFKRLTAL
QFEFGSTDHH VTRYARLTNR