Gene Mvan_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1957 
Symbol 
ID4645804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2089959 
End bp2090510 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content65% 
IMG OID639805444 
Producthypothetical protein 
Protein accessionYP_952782 
Protein GI120402953 
COG category[S] Function unknown 
COG ID[COG4329] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.522504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAT CAAAGAGTGG CTCCTCCGTC GAGCCGAGGA AACCCAGCGT CGCACCGGCT 
CTGCTGCTCG GCCTTGGCCT GGGTGGCTTC GTCGACGGCA TCGTCCTACA CGAGATCCTG
CAGTGGCACC ACATGGTCAG CCACGTCGAT GAGTATCCAA TGGACACGCT GTCAGGGCTG
GAGGTCAACG TCCTGGCCGA TGGCTTCTTT CACGTGGCGA CCTGGCTGCT GGTGTGGGCC
GGCACCACGA TGACCGTCGT TGCCTGGCGG CAACGTCGGC TGGCGCCCAC CTGGCCGTTC
CAGGTCGGGC TGCTGCTCGC GGGTTGGGGA ATCTTCAACC TGGTCGAGGG ATTGATCGAT
CACCAGATCC TCGGTGTTCA CCACGTGCGC GACGACCTCG GTGCCCCGCT GTCGTGGGAC
ATCGGATTCC TGATCTTCGG CGCACTTCTG GTGGCCGCCG GTTGGGCGCT GTACAGACGG
GGCGCCCGCA CGCTCGAGGA GCACTCCCGC GCGGCCATCC GTGAGGACAG CGAGGGCACT
GTCCGAAGCT GA
 
Protein sequence
MATSKSGSSV EPRKPSVAPA LLLGLGLGGF VDGIVLHEIL QWHHMVSHVD EYPMDTLSGL 
EVNVLADGFF HVATWLLVWA GTTMTVVAWR QRRLAPTWPF QVGLLLAGWG IFNLVEGLID
HQILGVHHVR DDLGAPLSWD IGFLIFGALL VAAGWALYRR GARTLEEHSR AAIREDSEGT
VRS