| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1936 |
|---|
| Symbol | |
|---|
| ID | 4648173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2069207 |
|---|
| End bp | 2072032 |
|---|
| Gene Length | 2826 bp |
|---|
| Protein Length | 941 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639805423 |
|---|
| Product | transport protein |
|---|
| Protein accession | YP_952762 |
|---|
| Protein GI | 120402933 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR00833] Transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCGGATG CGGGACGGTC CGGGATCGGC AGGATCATTC ACCTGCTCGC GGTGCCCATC
GTGCTCGGCT GGATTGCGCT CACCGTGCTC ACCAACGTGG CGGTCCCTTC GCTGGAGAAG
GTAGGCGAGG AACACACCGT CGGGATGAGC GCCAACGACG CGCCGTCGAT GATGTCGATG
GAGCGCGTCG GCGCGAATTT CGACGAGTTC GACTCCGACA GCAGCGCCAT GGTCGTGCTC
GAGGGCGAGC AGCCGCTCGG CGACGCGGCG CACCGTTACT ACGACGAACT CATCGGCAAG
CTGGAGGCCG ACACCGCCAA CGTGCAGCAC GTCGCCGACT TCTGGGGCGA TCCGCTGACC
GCGTCGGGTG CGCAGAGCAC CGACGGCAAG GCGGCGTACG TGCAGGTGTA CCTGCAGGGC
AATCAGGGGG AGCCGCGGGC CAACGAGGCG GTCGCCGCGG TCCGCGAGAT CGTCGACCAG
ACCCCGGCAC CACCCGGGCT CAAGGCGTAT GTGACCGGTG GCGCACCGCT GGTGGCCGAC
CAGCACAACG CCGGAGACAA GAGCGTTTTC CGGGTCACGC TGATCACCAT CGGTGTGATC
GCGGTGATGC TGCTTCTCGT CTTCCGGTCG GTGGCCACCA TGGTCCTGAT CCTGTTCATG
GTGTTCGCAG AACTCGGCGC GGCGCGGGGC ATCGTCGCGT TTCTCGCCAA TGCCGAGATC
ATCGGCCTGT CGACCTTCGC GACCAGCCTG CTGACGCTCA TGGTGATCGC CGCGGGTACC
GACTACGCCA TTTTCGCGAT AGGCCGATAT CAGGAGGCCC GGGGAGCGGG TGAGGACCGG
GAAACCGCGT ACTACACCAT GTTCCGAGGC ACTGCGCATG TCGTGCTCGG CTCCGGACTC
ACCATCGCCG GGGCCATGCT GTGCCTGAGT TTCACGCGGC TGCCGTACTT CCAGACGATG
GGTGTGCCGT GCGCGGTGGG CACGTTCGTC GCGGTCATGG CGGCGCTGAC ACTCGGGCCC
GCGGTGGTGG CGATCGGTAG CCGGTTCGGG CTGTTCGACC CCAAGCGCGC CATCAGCTCC
CGCGGCTGGC GGCGTATCGG GGTGTCGGTG GTGCGCTGGC CGGGTCCGGT GCTGGCCGCC
ACGCTGGCGC TGGCACTGGT CGGGCTCGTC GCGCTGCCGG GATACAAGAC CAACTACGAC
TCCCGCGACT ACCTGCCCGA GGACGTCCCC GCCAACGTCG GCTACGCCGT CGCCGACCGG
CACTTCGGCA GCGCCAGGAT GAACCCCGAG CTGCTGATGG TCGAGAGCGA CCACGACCTG
CGCAACCCCG CGGACTTCCT CGTCATCGAC AAGATCGCCA AGGCCATCTT CCGGGTGCCC
GGGGTGGCGC GGGTGCAGAC GATCACCCGC CCCGACGGCA AACCGATCAA GCACACGACG
ATCCCGTTCC AGATGAGCAT GCGCAGCACC ACGAGCAGGC TCAACGAGAA GTACATGCAG
GACCGGATGG CCGACATGCT GGTGCAGGCC GATGCGATGC AGACCAACGT CGACACGATG
ACGAAGATGC AGAGCCTGAT GACGCAGATG TCGGCCGCCA CCCACGACAT GGTGACCAAG
ACCAAGAAGA CGGCTGTCGA CATCGTCGAA GTGCGGGACT ACCTGGCCAA TCTGGACGAC
TTCGTCCGCC CGGTCCGCAA TTACTTCTAC TGGGAACCGC ACTGCTACAA CATCCCGGTC
TGCGCGACGA TGCGGTCGGT GTTCGACACC CTCGACGGCA TCAACCCGCT GACCGACGAC
ATCCAGGAAC TGATACCGGA CCTGGAACGC CTCGATGCGC TGATGCCGCA ACTGATTGCC
CTGTTGCCCA GTCAGATCGA GTCGATGCGA AACATGCAGT CGATGATGCT GACGATGTAT
CAGAGTCAAA AGGGCCTGCA GGACCAGATG GCGTCGCAGT CCGAGGACGC CGACGCGATG
GGGGAAGCCT TCGACGACTC CATGAACGAC GACTCGTTCT ATCTGCCGCC GGAGGCGTTC
GACAACGACG ACTTCAAGCG GGGCATCGAG AACTTCATCT CCCCGGACGG CAAGTCGGTG
CGCTTCATCA TCGCCCACGA GGGCGATCCG GCAACGGTGG AAGGCATTTC ACGCGTGCTG
CCGATCAAGA CGGCGGCCAA GGAGGCCATC AAGGGCACGC CGCTGGAGGG CTCCACCGTG
TACCTCGCGG GCACCGCGGC AACCTACAAG GACATGCGCG ACGGCGCGAA CTACGACCTG
CTGATCGCCG GAATCGCAGC TGTCACACTC ATTTTCGTGA TCATGCTGAT CATCACCCGC
AGTGTCGTGG CAGCCGCGGT CATCGTAGGC ACCGTATTGC TGTCGCTCGG AGCGTCGTTC
GGGCTCTCGG TGCTGCTGTG GCAGCACATC ATCGGGTTGG CGTTGCACTG GATGGTGTTG
CCGATGGCGG TCATCCTGCT GCTCGCGGTC GGCTCGGACT ACAACCTGCT GCTGGTGTCG
CGGTTCAAGG AGGAGCTCGC CGGTGGGCTG AAGACCGGGA TCATCCGCTC GATGGCAGGC
ACCGGATCGG TGGTGACGTC GGCCGGTCTG GTGTTCGCGT TCACGATGGC CTCGTTCGCG
TTCAGCGACC TGAAGGTGAT GGCGCAGGTC GGCACCACGA TCGCGCTCGG ACTGCTGTTC
GACACGCTGA TCGTGCGGTC GTTCATGACG CCGGCGGTGG CTGCGCTGCT CGGGCGCTGG
TTCTGGTGGC CGCAGAAGGT GCGCAGTCAC GCCTCCCAAC GCAGGCTGGC CGCGCTCAAC
CACTGA
|
|---|
| Protein sequence | MADAGRSGIG RIIHLLAVPI VLGWIALTVL TNVAVPSLEK VGEEHTVGMS ANDAPSMMSM
ERVGANFDEF DSDSSAMVVL EGEQPLGDAA HRYYDELIGK LEADTANVQH VADFWGDPLT
ASGAQSTDGK AAYVQVYLQG NQGEPRANEA VAAVREIVDQ TPAPPGLKAY VTGGAPLVAD
QHNAGDKSVF RVTLITIGVI AVMLLLVFRS VATMVLILFM VFAELGAARG IVAFLANAEI
IGLSTFATSL LTLMVIAAGT DYAIFAIGRY QEARGAGEDR ETAYYTMFRG TAHVVLGSGL
TIAGAMLCLS FTRLPYFQTM GVPCAVGTFV AVMAALTLGP AVVAIGSRFG LFDPKRAISS
RGWRRIGVSV VRWPGPVLAA TLALALVGLV ALPGYKTNYD SRDYLPEDVP ANVGYAVADR
HFGSARMNPE LLMVESDHDL RNPADFLVID KIAKAIFRVP GVARVQTITR PDGKPIKHTT
IPFQMSMRST TSRLNEKYMQ DRMADMLVQA DAMQTNVDTM TKMQSLMTQM SAATHDMVTK
TKKTAVDIVE VRDYLANLDD FVRPVRNYFY WEPHCYNIPV CATMRSVFDT LDGINPLTDD
IQELIPDLER LDALMPQLIA LLPSQIESMR NMQSMMLTMY QSQKGLQDQM ASQSEDADAM
GEAFDDSMND DSFYLPPEAF DNDDFKRGIE NFISPDGKSV RFIIAHEGDP ATVEGISRVL
PIKTAAKEAI KGTPLEGSTV YLAGTAATYK DMRDGANYDL LIAGIAAVTL IFVIMLIITR
SVVAAAVIVG TVLLSLGASF GLSVLLWQHI IGLALHWMVL PMAVILLLAV GSDYNLLLVS
RFKEELAGGL KTGIIRSMAG TGSVVTSAGL VFAFTMASFA FSDLKVMAQV GTTIALGLLF
DTLIVRSFMT PAVAALLGRW FWWPQKVRSH ASQRRLAALN H
|
|---|
| |