| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1934 |
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| Symbol | |
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| ID | 4648171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 2065980 |
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| End bp | 2068013 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639805421 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_952760 |
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| Protein GI | 120402931 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGA GCTCAGCCGA GGAGCCCGGC GGCCCGCCGA CGGTGGTCGC CACCGCGGAA
CCGCCTGCGG TGCCGCAGGT CGACGATCAG GAGAAGCCGG CCCGCGAGCT GCGCGGGTGG
ACCCAGCGGT TCGTCGCCGG CGTCGCGTTC GGCGTCGCGA TCCTGACGAT CTGGCAGGTG
TTTCGGCCGC TGTCGCAGGG CAGCCAGTAC TACCTGATCG TGTTCCTGGC CGGCTCGCTG
CCGCTGGTGT TCCTGGCCTA CCGGTCCGGA ATTCGGTCGT CCCGTTCTTC GCAGCAGGAA
CCGGGAGCGC TGGACTGGTC GCTGGCGCTG GTCACCCTGC TGGTCTGTCT GTACCCGATC
CTGCCGGTGC GCATCGGCGC CGGCGGCGGT GGCTACAACG CGTTCCTGGA CCGGCAGGGC
ATGCTCGAAC CGATCGACGT CGCGATGGGT GCGCTGCTTC TCGTCCTCAT CCTGGAGGCG
TGCCGGCGAA CCACCGGGTG GGCACTGCCG GTCGTGTGCG CGATGTTCCT GGCCTACGGC
TACTACGGCG GCCTGATGCC GCAGGGTTGG GCGATCGCCC ACGCCGGCCT GGACTTCGAC
CAGATCATCG ACGCGCTGTA CAACTCGGGC AGCGGGTTCT TCGGCACCCC GCTCGATGTC
GCGGCGACCT ACATCGTGCT GTTCACCATC TACGGTGCGG TACTCGAACT CTCGGGCGGA
GCGCGCTTCT TCGTCGACCT GTCGGTGGCC GCGTTCCGGC GCTCGCGCAG CGCGGCGGGC
CGCACCACCG TCGCGTCCGG TTTCCTGCTC GGCACCGTCT CCGGCTCGGG CACCGCGACG
GCGGTCAGCG TGGGCGCGAT CACCTGGCCG ATCATGCGCC GGGCCGGGTA CACGCCCGAA
CGTGCCGGCG GTGTGCTGGC CGCCGCGGGG GTCGGTGCGC TGCTGTCGCC GCCCACCCTG
GGGGCGGCGG CCTTCATCGT CGCCGAGTAC CTGGAGGTGT CCTACCTGAC GGTGCTCGGC
TGGGCGATGA TCCCCACCGT GCTGTACTAC CTCGGCATCC TGCTGGCCGT CGAGATCGAC
GCCAGGCGGT TCGGCATGAA GCCCGCCCAT CAGCAGAGCG AATCGCCATG GAAGTTGTTG
GCCCGCTTCG GTTATCACTT CTCGTCGTTG GTCGCGATCG TCGTGCTGCT GGCGGCCGGG
ATGTCGGCCA CCCGGGCGGT CGTCTACGCG ACGGCCCTGG CGTTCGTGCT GTCGTTCCTG
GACCGGTGGG GCAGGCTGAC CCCGCGCCGG CTCTTCGATG CCCTCAGCGT CGGCGTTCGC
GGCGTACTTC CCGTCGTCGC GGTCTGTGCG GCTGCCGGTG TCATCACCGC GATGACCACG
AAAACGGGTC TGGGAGCGCA GTTTTCGTCG GTCCTGGTGG GCGGGGTGGA CGCGCTGACC
GACAACCGCA CCCTGATGCT CGCCCTGACA GCGGTCTTCG CCGCGGTGGC GCTGGCACTT
CTCGGGCTCG CGATACCGGT GACCGCGTCG TTCGTGATCG GGTGGGTGAT CATCGGACCG
GCACTGCTCG CGCTGGATGT GCCCGCACCC GCGGCGGCCA TGTTCGTCTT CTACTACTCG
GTGCTTTCGG AGGTCACCCC GCCGACCGCG CTGGCGGCCG TTGGCGCCTC GGCGGTCACC
GGCGGGCGGG CCATCCCGAC GATGTGGCAG GCGCTGCGCT ACGCCGCACC CGCCTTTCTG
GTGCCCATCG CGTTCGTGTT GACGGCTCCG GGGGAGTACC TGCTGGGCCG CGGGCCGGTC
CTCGGCGTGA TCTGGGCGTC GGTCGCCGCA TGCGCCGGCA TCGTCGCGCT GTCGTTCGCC
GCCGGTGGCT GGGTGCTCGG CGTCGGCGCG CTCGCCCCGG TCCCGCGGGC GTTCACCGCG
ATCGCAGCGC TGCTGCTGCT GTTCCTGCAG CCCGCCACCA TCGCGGCGGG ATCGGCGTGT
CTGCTCGGTG CAGTCGCGTT CACCTTCATC ACCGACAAGA GGAGACGGAC ATGA
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| Protein sequence | MDRSSAEEPG GPPTVVATAE PPAVPQVDDQ EKPARELRGW TQRFVAGVAF GVAILTIWQV
FRPLSQGSQY YLIVFLAGSL PLVFLAYRSG IRSSRSSQQE PGALDWSLAL VTLLVCLYPI
LPVRIGAGGG GYNAFLDRQG MLEPIDVAMG ALLLVLILEA CRRTTGWALP VVCAMFLAYG
YYGGLMPQGW AIAHAGLDFD QIIDALYNSG SGFFGTPLDV AATYIVLFTI YGAVLELSGG
ARFFVDLSVA AFRRSRSAAG RTTVASGFLL GTVSGSGTAT AVSVGAITWP IMRRAGYTPE
RAGGVLAAAG VGALLSPPTL GAAAFIVAEY LEVSYLTVLG WAMIPTVLYY LGILLAVEID
ARRFGMKPAH QQSESPWKLL ARFGYHFSSL VAIVVLLAAG MSATRAVVYA TALAFVLSFL
DRWGRLTPRR LFDALSVGVR GVLPVVAVCA AAGVITAMTT KTGLGAQFSS VLVGGVDALT
DNRTLMLALT AVFAAVALAL LGLAIPVTAS FVIGWVIIGP ALLALDVPAP AAAMFVFYYS
VLSEVTPPTA LAAVGASAVT GGRAIPTMWQ ALRYAAPAFL VPIAFVLTAP GEYLLGRGPV
LGVIWASVAA CAGIVALSFA AGGWVLGVGA LAPVPRAFTA IAALLLLFLQ PATIAAGSAC
LLGAVAFTFI TDKRRRT
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