Gene Mvan_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1911 
SymbolprfB 
ID4648001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2039390 
End bp2040496 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID639805398 
Productpeptide chain release factor 2 
Protein accessionYP_952737 
Protein GI120402908 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.212403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCCG ACCGCCAAGC CGACATCGCC GCCCTCGACG CCACGCTGAC CACCGTGGAG 
CGTGTGATCG ACGTCGACGG GCTGCGCGGG CGCATCGAGC AGCTCGAAAA GGACGCCTCC
GATCCCCAGC TGTGGGACGA CCAGGCGCGG GCGCAGAAGG TCACCAGCGA CCTGTCCCAC
GCGCAGGGTG AACTCCGGCG CATCGAGGAA CTGCGTGGCC GGCTCGAGGA TCTACCGGTG
CTCTACGAGC TGGCGGCCGA AGAAGGCGGC AGTGACGAAG TGGCCGAGGC CGACGCCGAG
CTGACCAAGC TGCGCGAGGA CATCGAGGCC ATGGAGGTGC GCACGCTGCT GTCCGGCGAG
TACGACGAGC GGGAGGCGCT GGTCACCATC CGGTCAGGGG CGGGCGGCGT GGACGCCGCC
GACTGGGCCG AGATGCTGAT GCGGATGTAC ATCCGCTGGG CCGAGCAGCA CAAATACCCG
GTGGAGGTGT TCGACACCTC CTACGCGGAG GAGGCCGGCA TCAAGAGCGC GACGTTCGCC
GTGCACGCTC CGTACGCGTA CGGGAATCTG TCCGTCGAGC AGGGCACCCA CCGGCTGGTG
CGCATCAGCC CGTTCGACAA CCAGAATCGG CGACAGACGT CGTTCGCCGA CGTCGAGGTG
CTGCCCGTCA CCGAGACCAC CGACCACATC GAAATCCCCG AGGGCGACGT CCGCGTCGAC
GTCTACCGGT CCAGCGGGCC CGGCGGACAG TCGGTCAACA CCACCGACTC GGCGGTCCGG
TTGACCCACA TCCCGACCGG CATCGTCGTC ACCTGTCAGA ACGAGAAGTC CCAGCTGCAG
AACAAGGTGT CCGCGATGCG CGTGCTCCAG GCGAAACTGC TGGAACGCAA GCGGTTGGAA
GAGCGTGCCG AGATGGACGC CCTCAAAGGC GACGGCGGCA GCTCATGGGG TAACCAGATG
CGGTCCTATG TTCTGCATCC CTACCAGATG GTGAAGGACC TGCGCACCGA GTACGAGGTC
GGAAACCCGT CCGCCGTGCT CGACGGAGAC ATCGACGGCT TCCTGGAGGC CGGTATCCGG
TGGCGCAACC GAAAAGATGA CGAGTAA
 
Protein sequence
MDPDRQADIA ALDATLTTVE RVIDVDGLRG RIEQLEKDAS DPQLWDDQAR AQKVTSDLSH 
AQGELRRIEE LRGRLEDLPV LYELAAEEGG SDEVAEADAE LTKLREDIEA MEVRTLLSGE
YDEREALVTI RSGAGGVDAA DWAEMLMRMY IRWAEQHKYP VEVFDTSYAE EAGIKSATFA
VHAPYAYGNL SVEQGTHRLV RISPFDNQNR RQTSFADVEV LPVTETTDHI EIPEGDVRVD
VYRSSGPGGQ SVNTTDSAVR LTHIPTGIVV TCQNEKSQLQ NKVSAMRVLQ AKLLERKRLE
ERAEMDALKG DGGSSWGNQM RSYVLHPYQM VKDLRTEYEV GNPSAVLDGD IDGFLEAGIR
WRNRKDDE