Gene Mvan_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1906 
Symbol 
ID4647996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2033857 
End bp2035083 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID639805393 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_952732 
Protein GI120402903 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATCA TGGCGATCAA CCTGGAAATG CCGAAGAAGC TCCAAGCGGT CATCGAGAAG 
GGCCATCAGG GGGCGGCCGA GATGATCCGG CCCATCTCCC GCAAGTACGA CCTCAAGGAG
CATGCCTACC CGGTCGAACT CGACACGCTC GCCGACATCT TCGACGGCAT CACGGCGGCC
AAGACGATCT CGTTCGCGGG CACGGACGCG TTCGTCGGCG CCCGCGACGA CGGACAGAAG
TCGAATGTCA ACGGCGCCAA CATGTCTGCG CTGCTGAACG CGCTGGAGAT CTCCTGGGGC
GATGTGGCGC TGCTGCTGTC GGTGCCCCGG CAGGGTCTGG GCAACGCGGC GATCTCGTCG
GTGGCCACAC CGGAACAGCT GGAGCGCCTG GGCAAGGGCG TGTGGGCGGC GATGGCGATC
ACCGAGCCGA GCTTCGGGTC GGATTCGGCT GCCGTGTCGA CCACCGCGGT GCTCGACGGC
GACGAGTATG TGATCAACGG GGAGAAGATC TTCGTCACCG CCGGCTCGCG TGCGTCCCAC
ATCGTGGTGT GGGCGACGCT GGACAAGTCC AAGGGCCGTG CCGCGATCAA GTCGTTCATC
GTGCCGCGCG AACATCCCGG GGTGACGGTC GAGCGCCTGG AGCACAAGCT CGGCATCAAG
GCGTCGGACA CGGCGGTGAT CCGCTTCGAC AATGCCCGCA TCCCGAAGGA CAACCTGCTC
GGCGATCCGG AGATCCACGT GGAGAAGGGT TTTGCCGGGG TCATGGAGAC CTTCGACAAC
ACCCGTCCGA TCGTCGCCGC GATGGCCGTC GGCGTGGCAC GCGCCGCGCT GGAGGATCTG
CGCAAGATCC TCACCGATGC GGGCATCGAG ATCTCCTACG ACAAACCGGC GCACGCGCAG
AGCGCGGCGG CGGCGGAATT CCTCCGGATG GAGGCCGAGT GGGAGTCCGG CTACCTGCTG
ACGGTGCGCT CGGCGTGGCA GGCCGACAAC CGGATTCCCA ACTCCAAGGA AGCCTCCATG
GGTAAGGCCA AGGCCGCCCG GGTCGCCAGT GACATCACCC TCAAGGCCGT CGAAATGGCC
GGAACCACTG GCTATTCCGA GGAGACGCTG CTGGAGAAGT GGGCCCGCGA CTCGAAGATC
CTCGACATCT TCGAGGGCAC CCAGCAGATC CAGCAACTGG TGGTCGCCCG CCGCCTGCTC
GGCCTGACCT CAGCCCAACT GAAATAG
 
Protein sequence
MKIMAINLEM PKKLQAVIEK GHQGAAEMIR PISRKYDLKE HAYPVELDTL ADIFDGITAA 
KTISFAGTDA FVGARDDGQK SNVNGANMSA LLNALEISWG DVALLLSVPR QGLGNAAISS
VATPEQLERL GKGVWAAMAI TEPSFGSDSA AVSTTAVLDG DEYVINGEKI FVTAGSRASH
IVVWATLDKS KGRAAIKSFI VPREHPGVTV ERLEHKLGIK ASDTAVIRFD NARIPKDNLL
GDPEIHVEKG FAGVMETFDN TRPIVAAMAV GVARAALEDL RKILTDAGIE ISYDKPAHAQ
SAAAAEFLRM EAEWESGYLL TVRSAWQADN RIPNSKEASM GKAKAARVAS DITLKAVEMA
GTTGYSEETL LEKWARDSKI LDIFEGTQQI QQLVVARRLL GLTSAQLK